Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLP35914 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCLP35914 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HMGCLP35914 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCLP35914 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGCLP35914 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 TSPY20P-201ENST00000450910 630 ntBASIC19.71■□□□□ 0.75
HMGCLP35914 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCLP35914 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 FAM201B-201ENST00000458407 597 ntBASIC19.71■□□□□ 0.75
HMGCLP35914 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
HMGCLP35914 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCLP35914 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCLP35914 MTDHP1-201ENST00000605323 784 ntBASIC19.71■□□□□ 0.75
HMGCLP35914 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
HMGCLP35914 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGCLP35914 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLP35914 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLP35914 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCLP35914 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.7■□□□□ 0.74
HMGCLP35914 AC073648.6-201ENST00000641589 218 ntBASIC19.7■□□□□ 0.74
HMGCLP35914 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HMGCLP35914 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HMGCLP35914 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLP35914 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCLP35914 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLP35914 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLP35914 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLP35914 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLP35914 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCLP35914 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCLP35914 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLP35914 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLP35914 AC128676.1-201ENST00000454392 318 ntBASIC19.69■□□□□ 0.74
HMGCLP35914 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGCLP35914 PRKY-204ENST00000533551 1019 ntBASIC19.69■□□□□ 0.74
HMGCLP35914 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGCLP35914 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGCLP35914 AC233263.1-201ENST00000578059 224 ntBASIC19.69■□□□□ 0.74
HMGCLP35914 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCLP35914 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGCLP35914 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGCLP35914 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HMGCLP35914 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HMGCLP35914 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.68■□□□□ 0.74
HMGCLP35914 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCLP35914 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLP35914 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HMGCLP35914 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGCLP35914 AFG3L1P-217ENST00000557444 2447 ntBASIC19.67■□□□□ 0.74
HMGCLP35914 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 AC125437.2-201ENST00000625180 2167 ntBASIC19.67■□□□□ 0.74
HMGCLP35914 AP006587.1-201ENST00000534129 1502 ntBASIC19.67■□□□□ 0.74
HMGCLP35914 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLP35914 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCLP35914 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLP35914 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGCLP35914 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms