Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RORAP35398 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RORAP35398 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.77■□□□□ 0.6
RORAP35398 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.77■□□□□ 0.6
RORAP35398 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RORAP35398 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.77■□□□□ 0.6
RORAP35398 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.77■□□□□ 0.6
RORAP35398 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RORAP35398 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 FEM1AP1-201ENST00000431297 1995 ntBASIC18.77■□□□□ 0.59
RORAP35398 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RORAP35398 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RORAP35398 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RORAP35398 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RORAP35398 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.77■□□□□ 0.59
RORAP35398 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RORAP35398 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.76■□□□□ 0.59
RORAP35398 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.76■□□□□ 0.59
RORAP35398 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.76■□□□□ 0.59
RORAP35398 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.76■□□□□ 0.59
RORAP35398 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 AC020907.5-201ENST00000624372 1936 ntBASIC18.76■□□□□ 0.59
RORAP35398 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RORAP35398 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RORAP35398 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RORAP35398 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RORAP35398 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RORAP35398 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.75■□□□□ 0.59
RORAP35398 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.75■□□□□ 0.59
RORAP35398 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.75■□□□□ 0.59
RORAP35398 REXO1L12P-201ENST00000622156 912 ntBASIC18.75■□□□□ 0.59
RORAP35398 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.75■□□□□ 0.59
RORAP35398 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.75■□□□□ 0.59
RORAP35398 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RORAP35398 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RORAP35398 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.75■□□□□ 0.59
RORAP35398 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.75■□□□□ 0.59
RORAP35398 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RORAP35398 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
RORAP35398 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RORAP35398 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 AC073314.1-201ENST00000568729 2216 ntBASIC18.74■□□□□ 0.59
RORAP35398 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 AP005212.1-201ENST00000581547 1997 ntBASIC18.74■□□□□ 0.59
RORAP35398 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.74■□□□□ 0.59
RORAP35398 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
RORAP35398 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.74■□□□□ 0.59
RORAP35398 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.74■□□□□ 0.59
RORAP35398 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RORAP35398 AL353708.3-201ENST00000610272 989 ntBASIC18.74■□□□□ 0.59
RORAP35398 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RORAP35398 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RORAP35398 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RORAP35398 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.73■□□□□ 0.59
RORAP35398 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
RORAP35398 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.73■□□□□ 0.59
RORAP35398 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.73■□□□□ 0.59
RORAP35398 AL355075.4-201ENST00000554988 638 ntBASIC18.73■□□□□ 0.59
RORAP35398 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.73■□□□□ 0.59
RORAP35398 CD177P1-201ENST00000606252 935 ntBASIC18.73■□□□□ 0.59
RORAP35398 AC026471.5-201ENST00000615068 467 ntBASIC18.73■□□□□ 0.59
RORAP35398 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RORAP35398 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms