Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CKS2P33552 MIR3621-201ENST00000580529 85 ntBASIC14.53□□□□□ -0.08
CKS2P33552 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.53□□□□□ -0.08
CKS2P33552 AC008175.2-201ENST00000612840 297 ntBASIC14.53□□□□□ -0.08
CKS2P33552 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 AL032819.2-201ENST00000624543 2162 ntBASIC14.53□□□□□ -0.08
CKS2P33552 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.53□□□□□ -0.08
CKS2P33552 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CKS2P33552 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 AC116050.2-201ENST00000612102 1779 ntBASIC14.52□□□□□ -0.08
CKS2P33552 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CKS2P33552 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
CKS2P33552 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.52□□□□□ -0.08
CKS2P33552 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CKS2P33552 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CKS2P33552 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKS2P33552 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CKS2P33552 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.52□□□□□ -0.09
CKS2P33552 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.52□□□□□ -0.09
CKS2P33552 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CKS2P33552 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CKS2P33552 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.52□□□□□ -0.09
CKS2P33552 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CKS2P33552 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CKS2P33552 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.52□□□□□ -0.09
CKS2P33552 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CKS2P33552 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKS2P33552 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CKS2P33552 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CKS2P33552 POU5F1P4-201ENST00000413175 1085 ntBASIC14.51□□□□□ -0.09
CKS2P33552 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.51□□□□□ -0.09
CKS2P33552 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
CKS2P33552 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.51□□□□□ -0.09
CKS2P33552 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.51□□□□□ -0.09
CKS2P33552 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CKS2P33552 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKS2P33552 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.51□□□□□ -0.09
CKS2P33552 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 AC009299.2-201ENST00000482477 511 ntBASIC14.5□□□□□ -0.09
CKS2P33552 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 AC133561.4-201ENST00000566112 224 ntBASIC14.5□□□□□ -0.09
CKS2P33552 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.5□□□□□ -0.09
CKS2P33552 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms