Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HOXC12P31275 AC012618.2-201ENST00000428058 849 ntBASIC17.52■□□□□ 0.4
HOXC12P31275 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC12P31275 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC12P31275 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC12P31275 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
HOXC12P31275 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC12P31275 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXC12P31275 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC12P31275 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC12P31275 KRT16P6-202ENST00000425692 1426 ntBASIC17.52■□□□□ 0.4
HOXC12P31275 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
HOXC12P31275 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC12P31275 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC12P31275 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC12P31275 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC12P31275 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC12P31275 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC12P31275 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 KRT8P17-201ENST00000453110 1448 ntBASIC17.51■□□□□ 0.39
HOXC12P31275 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 PRKY-204ENST00000533551 1019 ntBASIC17.51■□□□□ 0.39
HOXC12P31275 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXC12P31275 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC12P31275 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 AC233702.5-201ENST00000584107 538 ntBASIC17.51■□□□□ 0.39
HOXC12P31275 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC12P31275 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC12P31275 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXC12P31275 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC12P31275 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC12P31275 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC12P31275 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC12P31275 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HOXC12P31275 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC12P31275 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC12P31275 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC12P31275 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXC12P31275 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HOXC12P31275 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC12P31275 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC12P31275 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC12P31275 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HOXC12P31275 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HOXC12P31275 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXC12P31275 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC12P31275 RPS2P55-201ENST00000397318 883 ntBASIC17.49■□□□□ 0.39
HOXC12P31275 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC12P31275 AC107956.1-201ENST00000494359 873 ntBASIC17.49■□□□□ 0.39
HOXC12P31275 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXC12P31275 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC12P31275 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HOXC12P31275 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXC12P31275 AC120498.8-201ENST00000614275 531 ntBASIC17.49■□□□□ 0.39
HOXC12P31275 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC12P31275 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC12P31275 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC12P31275 CLDN5-201ENST00000403084 2357 ntBASIC17.48■□□□□ 0.39
HOXC12P31275 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC12P31275 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC12P31275 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC12P31275 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC12P31275 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms