Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.12■■□□□ 1.77
RXRBP28702 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RXRBP28702 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RXRBP28702 HLA-A-201ENST00000376802 1334 ntBASIC26.12■■□□□ 1.77
RXRBP28702 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RXRBP28702 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.11■■□□□ 1.77
RXRBP28702 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.11■■□□□ 1.77
RXRBP28702 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RXRBP28702 AL121772.3-201ENST00000610840 674 ntBASIC26.11■■□□□ 1.77
RXRBP28702 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RXRBP28702 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC26.11■■□□□ 1.77
RXRBP28702 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RXRBP28702 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.1■■□□□ 1.77
RXRBP28702 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC26.1■■□□□ 1.77
RXRBP28702 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 PENK-208ENST00000523051 772 ntTSL 5 BASIC26.1■■□□□ 1.77
RXRBP28702 AP002414.4-201ENST00000589764 1148 ntBASIC26.1■■□□□ 1.77
RXRBP28702 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 AC011498.5-201ENST00000592027 486 ntBASIC26.1■■□□□ 1.77
RXRBP28702 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RXRBP28702 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RXRBP28702 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RXRBP28702 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 HBZP1-201ENST00000354915 429 ntBASIC26.09■■□□□ 1.77
RXRBP28702 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.09■■□□□ 1.77
RXRBP28702 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC26.09■■□□□ 1.77
RXRBP28702 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC26.09■■□□□ 1.77
RXRBP28702 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RXRBP28702 AL355385.1-201ENST00000606123 409 ntBASIC26.09■■□□□ 1.77
RXRBP28702 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC26.09■■□□□ 1.77
RXRBP28702 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.09■■□□□ 1.77
RXRBP28702 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RXRBP28702 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.09■■□□□ 1.77
RXRBP28702 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.09■■□□□ 1.77
RXRBP28702 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RXRBP28702 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RXRBP28702 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC26.08■■□□□ 1.77
RXRBP28702 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.08■■□□□ 1.77
RXRBP28702 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RXRBP28702 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
RXRBP28702 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC26.08■■□□□ 1.77
RXRBP28702 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC26.08■■□□□ 1.77
RXRBP28702 NEK4P2-201ENST00000580004 1012 ntBASIC26.08■■□□□ 1.77
RXRBP28702 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RXRBP28702 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
RXRBP28702 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.08■■□□□ 1.76
RXRBP28702 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RXRBP28702 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RXRBP28702 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RXRBP28702 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RXRBP28702 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
RXRBP28702 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RXRBP28702 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.07■■□□□ 1.76
RXRBP28702 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC26.07■■□□□ 1.76
RXRBP28702 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RXRBP28702 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.07■■□□□ 1.76
RXRBP28702 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RXRBP28702 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RXRBP28702 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RXRBP28702 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.06■■□□□ 1.76
RXRBP28702 IL11-204ENST00000590625 1028 ntTSL 2 BASIC26.06■■□□□ 1.76
RXRBP28702 HLA-A-209ENST00000638375 975 ntBASIC26.06■■□□□ 1.76
RXRBP28702 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
RXRBP28702 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RXRBP28702 KRT8P20-201ENST00000423953 1409 ntBASIC26.05■■□□□ 1.76
RXRBP28702 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
RXRBP28702 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RXRBP28702 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
RXRBP28702 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.05■■□□□ 1.76
RXRBP28702 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.05■■□□□ 1.76
RXRBP28702 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms