Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.53■□□□□ 0.4
CTLA4P16410 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.53■□□□□ 0.4
CTLA4P16410 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.53■□□□□ 0.4
CTLA4P16410 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.53■□□□□ 0.4
CTLA4P16410 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.53■□□□□ 0.4
CTLA4P16410 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.53■□□□□ 0.4
CTLA4P16410 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTLA4P16410 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
CTLA4P16410 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CTLA4P16410 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTLA4P16410 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
CTLA4P16410 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTLA4P16410 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CTLA4P16410 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CTLA4P16410 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 NCF1B-203ENST00000435988 1254 ntBASIC17.52■□□□□ 0.4
CTLA4P16410 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTLA4P16410 AC092118.2-201ENST00000613495 667 ntBASIC17.52■□□□□ 0.4
CTLA4P16410 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.52■□□□□ 0.4
CTLA4P16410 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTLA4P16410 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.52■□□□□ 0.4
CTLA4P16410 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.52■□□□□ 0.39
CTLA4P16410 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTLA4P16410 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTLA4P16410 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.52■□□□□ 0.39
CTLA4P16410 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTLA4P16410 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CTLA4P16410 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.51■□□□□ 0.39
CTLA4P16410 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.51■□□□□ 0.39
CTLA4P16410 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 TSPY6P-201ENST00000448518 926 ntBASIC17.51■□□□□ 0.39
CTLA4P16410 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.51■□□□□ 0.39
CTLA4P16410 AC005332.7-201ENST00000614046 2005 ntBASIC17.51■□□□□ 0.39
CTLA4P16410 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.51■□□□□ 0.39
CTLA4P16410 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTLA4P16410 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTLA4P16410 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTLA4P16410 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTLA4P16410 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 AC018553.1-201ENST00000616682 1458 ntBASIC17.5■□□□□ 0.39
CTLA4P16410 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTLA4P16410 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTLA4P16410 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 SLC29A4P1-201ENST00000398760 971 ntBASIC17.5■□□□□ 0.39
CTLA4P16410 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 AC091874.3-201ENST00000512672 1195 ntBASIC17.5■□□□□ 0.39
CTLA4P16410 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTLA4P16410 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.5■□□□□ 0.39
CTLA4P16410 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTLA4P16410 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTLA4P16410 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTLA4P16410 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
CTLA4P16410 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms