Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 LINC01465-201ENST00000408887 1940 ntBASIC18.65■□□□□ 0.58
NCK1P16333 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 AC142381.2-201ENST00000566120 298 ntBASIC18.65■□□□□ 0.58
NCK1P16333 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.65■□□□□ 0.58
NCK1P16333 SLC7A5P1-201ENST00000568957 537 ntBASIC18.65■□□□□ 0.58
NCK1P16333 TERF1P2-201ENST00000583350 1212 ntBASIC18.65■□□□□ 0.58
NCK1P16333 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NCK1P16333 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 AC004854.2-201ENST00000608450 1441 ntBASIC18.65■□□□□ 0.58
NCK1P16333 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCK1P16333 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.64■□□□□ 0.58
NCK1P16333 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NCK1P16333 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCK1P16333 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NCK1P16333 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NCK1P16333 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
NCK1P16333 PGM5P4-201ENST00000421970 445 ntBASIC18.64■□□□□ 0.57
NCK1P16333 AC097381.1-201ENST00000429019 1296 ntBASIC18.64■□□□□ 0.57
NCK1P16333 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.57
NCK1P16333 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.64■□□□□ 0.57
NCK1P16333 AIRN-201ENST00000601203 4374 ntBASIC18.64■□□□□ 0.57
NCK1P16333 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NCK1P16333 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCK1P16333 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
NCK1P16333 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCK1P16333 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
NCK1P16333 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
NCK1P16333 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NCK1P16333 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
NCK1P16333 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.63■□□□□ 0.57
NCK1P16333 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
NCK1P16333 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.63■□□□□ 0.57
NCK1P16333 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.63■□□□□ 0.57
NCK1P16333 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCK1P16333 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NCK1P16333 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NCK1P16333 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NCK1P16333 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.62■□□□□ 0.57
NCK1P16333 KRT8P17-201ENST00000453110 1448 ntBASIC18.62■□□□□ 0.57
NCK1P16333 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.62■□□□□ 0.57
NCK1P16333 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.62■□□□□ 0.57
NCK1P16333 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.62■□□□□ 0.57
NCK1P16333 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.62■□□□□ 0.57
NCK1P16333 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCK1P16333 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NCK1P16333 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.62■□□□□ 0.57
NCK1P16333 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NCK1P16333 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
NCK1P16333 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NCK1P16333 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 CYP21A1P-202ENST00000354927 1481 ntBASIC18.61■□□□□ 0.57
NCK1P16333 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms