Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFRAP16234 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDGFRAP16234 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFRAP16234 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFRAP16234 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFRAP16234 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.73■□□□□ 0.91
PDGFRAP16234 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFRAP16234 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFRAP16234 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFRAP16234 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFRAP16234 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.73■□□□□ 0.91
PDGFRAP16234 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFRAP16234 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFRAP16234 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 AC124283.5-201ENST00000624661 1809 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFRAP16234 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 AP003097.1-201ENST00000530657 1135 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.72■□□□□ 0.91
PDGFRAP16234 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.72■□□□□ 0.91
PDGFRAP16234 SOX15-203ENST00000570788 1093 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PDGFRAP16234 TMEM191A-211ENST00000637163 1067 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 AC018553.1-201ENST00000616682 1458 ntBASIC20.72■□□□□ 0.91
PDGFRAP16234 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.72■□□□□ 0.91
PDGFRAP16234 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PDGFRAP16234 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.72■□□□□ 0.91
PDGFRAP16234 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDGFRAP16234 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDGFRAP16234 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.71■□□□□ 0.91
PDGFRAP16234 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PDGFRAP16234 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
PDGFRAP16234 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.71■□□□□ 0.91
PDGFRAP16234 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.71■□□□□ 0.91
PDGFRAP16234 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PDGFRAP16234 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDGFRAP16234 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDGFRAP16234 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.71■□□□□ 0.91
PDGFRAP16234 AC116351.2-201ENST00000606540 1585 ntBASIC20.71■□□□□ 0.91
PDGFRAP16234 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.71■□□□□ 0.91
PDGFRAP16234 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PDGFRAP16234 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PDGFRAP16234 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.7■□□□□ 0.9
PDGFRAP16234 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.7■□□□□ 0.9
PDGFRAP16234 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.7■□□□□ 0.9
PDGFRAP16234 AC026366.1-201ENST00000488803 879 ntBASIC20.7■□□□□ 0.9
PDGFRAP16234 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.7■□□□□ 0.9
PDGFRAP16234 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.7■□□□□ 0.9
PDGFRAP16234 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.7■□□□□ 0.9
PDGFRAP16234 AC120498.8-201ENST00000614275 531 ntBASIC20.7■□□□□ 0.9
PDGFRAP16234 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDGFRAP16234 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.7■□□□□ 0.9
PDGFRAP16234 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDGFRAP16234 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms