Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LAMP1P11279 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LAMP1P11279 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LAMP1P11279 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LAMP1P11279 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.71■□□□□ 0.59
LAMP1P11279 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 MIR663A-201ENST00000385250 93 ntBASIC18.71■□□□□ 0.59
LAMP1P11279 BX276092.2-201ENST00000417668 665 ntBASIC18.71■□□□□ 0.59
LAMP1P11279 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 AC026185.1-201ENST00000445748 174 ntBASIC18.71■□□□□ 0.59
LAMP1P11279 RAP2CP1-201ENST00000605103 478 ntBASIC18.71■□□□□ 0.59
LAMP1P11279 AL137784.2-201ENST00000607332 1000 ntBASIC18.71■□□□□ 0.59
LAMP1P11279 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMP1P11279 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMP1P11279 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
LAMP1P11279 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMP1P11279 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LAMP1P11279 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.7■□□□□ 0.58
LAMP1P11279 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LAMP1P11279 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.7■□□□□ 0.58
LAMP1P11279 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LAMP1P11279 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LAMP1P11279 AC018445.3-201ENST00000624177 1945 ntBASIC18.7■□□□□ 0.58
LAMP1P11279 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMP1P11279 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMP1P11279 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMP1P11279 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LAMP1P11279 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMP1P11279 CROCCP5-201ENST00000436658 830 ntBASIC18.69■□□□□ 0.58
LAMP1P11279 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMP1P11279 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LAMP1P11279 AC098818.2-201ENST00000564925 2320 ntBASIC18.69■□□□□ 0.58
LAMP1P11279 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMP1P11279 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LAMP1P11279 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMP1P11279 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LAMP1P11279 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LAMP1P11279 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 MIR935-201ENST00000401179 91 ntBASIC18.68■□□□□ 0.58
LAMP1P11279 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.68■□□□□ 0.58
LAMP1P11279 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LAMP1P11279 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LAMP1P11279 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LAMP1P11279 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMP1P11279 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMP1P11279 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LAMP1P11279 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms