Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.07■□□□□ 0.8
MT-ND3P03897 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
MT-ND3P03897 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
MT-ND3P03897 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.07■□□□□ 0.8
MT-ND3P03897 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-ND3P03897 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.07■□□□□ 0.8
MT-ND3P03897 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.07■□□□□ 0.8
MT-ND3P03897 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MT-ND3P03897 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-ND3P03897 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-ND3P03897 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-ND3P03897 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.06■□□□□ 0.8
MT-ND3P03897 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-ND3P03897 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-ND3P03897 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.06■□□□□ 0.8
MT-ND3P03897 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-ND3P03897 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-ND3P03897 AC004408.2-201ENST00000623613 2777 ntBASIC20.06■□□□□ 0.8
MT-ND3P03897 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-ND3P03897 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND3P03897 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
MT-ND3P03897 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.05■□□□□ 0.8
MT-ND3P03897 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.05■□□□□ 0.8
MT-ND3P03897 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
MT-ND3P03897 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.05■□□□□ 0.8
MT-ND3P03897 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.05■□□□□ 0.8
MT-ND3P03897 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 AC007322.4-201ENST00000509611 723 ntBASIC20.05■□□□□ 0.8
MT-ND3P03897 AC105036.2-201ENST00000569468 176 ntBASIC20.05■□□□□ 0.8
MT-ND3P03897 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-ND3P03897 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.05■□□□□ 0.8
MT-ND3P03897 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MT-ND3P03897 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.05■□□□□ 0.8
MT-ND3P03897 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-ND3P03897 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MT-ND3P03897 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.04■□□□□ 0.8
MT-ND3P03897 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 GUSBP6-202ENST00000438529 1198 ntBASIC20.04■□□□□ 0.8
MT-ND3P03897 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.04■□□□□ 0.8
MT-ND3P03897 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 CD99P1-205ENST00000527459 561 ntBASIC20.04■□□□□ 0.8
MT-ND3P03897 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms