Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SIX6O95475 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX6O95475 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX6O95475 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX6O95475 MIR6724-1-201ENST00000616420 92 ntBASIC16.52■□□□□ 0.24
SIX6O95475 MIR6724-2-201ENST00000616483 92 ntBASIC16.52■□□□□ 0.24
SIX6O95475 MIR6724-4-201ENST00000617390 92 ntBASIC16.52■□□□□ 0.24
SIX6O95475 MIR6724-3-201ENST00000622482 92 ntBASIC16.52■□□□□ 0.24
SIX6O95475 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.52■□□□□ 0.24
SIX6O95475 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SIX6O95475 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIX6O95475 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.52■□□□□ 0.23
SIX6O95475 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.52■□□□□ 0.23
SIX6O95475 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.52■□□□□ 0.23
SIX6O95475 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SIX6O95475 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.52■□□□□ 0.23
SIX6O95475 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.52■□□□□ 0.23
SIX6O95475 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SIX6O95475 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX6O95475 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX6O95475 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX6O95475 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.51■□□□□ 0.23
SIX6O95475 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SIX6O95475 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SIX6O95475 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX6O95475 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SIX6O95475 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX6O95475 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX6O95475 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.5■□□□□ 0.23
SIX6O95475 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.5■□□□□ 0.23
SIX6O95475 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX6O95475 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX6O95475 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.5■□□□□ 0.23
SIX6O95475 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SIX6O95475 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SIX6O95475 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIX6O95475 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.5■□□□□ 0.23
SIX6O95475 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms