Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM13O60858 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM13O60858 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM13O60858 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TRIM13O60858 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM13O60858 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM13O60858 AIRN-201ENST00000601203 4374 ntBASIC19.43■□□□□ 0.7
TRIM13O60858 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM13O60858 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM13O60858 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM13O60858 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM13O60858 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM13O60858 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 RARRES2P4-201ENST00000514074 484 ntBASIC19.42■□□□□ 0.7
TRIM13O60858 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM13O60858 NTF6G-201ENST00000591094 616 ntBASIC19.42■□□□□ 0.7
TRIM13O60858 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM13O60858 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM13O60858 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM13O60858 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM13O60858 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM13O60858 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM13O60858 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM13O60858 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 AC093503.3-201ENST00000624917 2352 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM13O60858 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 HLA-G-202ENST00000376815 851 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 HLA-G-203ENST00000376818 1127 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 ZNRF2P3-201ENST00000424200 374 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 KRT18P11-201ENST00000435214 1283 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM13O60858 AC105020.6-201ENST00000621523 1217 ntBASIC19.41■□□□□ 0.7
TRIM13O60858 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM13O60858 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM13O60858 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM13O60858 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM13O60858 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRIM13O60858 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM13O60858 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM13O60858 KRT18P68-201ENST00000392293 1000 ntBASIC19.4■□□□□ 0.7
TRIM13O60858 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM13O60858 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.4■□□□□ 0.7
TRIM13O60858 MFSD11-216ENST00000590393 1141 ntBASIC19.4■□□□□ 0.7
TRIM13O60858 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM13O60858 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM13O60858 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
TRIM13O60858 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM13O60858 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM13O60858 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
TRIM13O60858 LINC01465-201ENST00000408887 1940 ntBASIC19.39■□□□□ 0.7
TRIM13O60858 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRIM13O60858 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM13O60858 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM13O60858 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRIM13O60858 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms