Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.47■■□□□ 1.19
CCNT1O60563 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.47■■□□□ 1.19
CCNT1O60563 AC069544.1-201ENST00000609399 999 ntBASIC22.47■■□□□ 1.19
CCNT1O60563 AL121906.2-201ENST00000621597 723 ntBASIC22.47■■□□□ 1.19
CCNT1O60563 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CCNT1O60563 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.47■■□□□ 1.19
CCNT1O60563 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.47■■□□□ 1.19
CCNT1O60563 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 TFP1-202ENST00000475455 1573 ntBASIC22.46■■□□□ 1.19
CCNT1O60563 AC009237.14-201ENST00000609975 1594 ntBASIC22.46■■□□□ 1.19
CCNT1O60563 TMEM179-206ENST00000616017 1645 ntBASIC22.46■■□□□ 1.19
CCNT1O60563 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
CCNT1O60563 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.46■■□□□ 1.19
CCNT1O60563 AC073648.6-201ENST00000641589 218 ntBASIC22.46■■□□□ 1.19
CCNT1O60563 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.46■■□□□ 1.19
CCNT1O60563 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.46■■□□□ 1.19
CCNT1O60563 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.46■■□□□ 1.19
CCNT1O60563 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCNT1O60563 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCNT1O60563 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNT1O60563 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCNT1O60563 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNT1O60563 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.45■■□□□ 1.18
CCNT1O60563 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCNT1O60563 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.45■■□□□ 1.18
CCNT1O60563 AL121829.2-201ENST00000620908 328 ntBASIC22.45■■□□□ 1.18
CCNT1O60563 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.45■■□□□ 1.18
CCNT1O60563 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCNT1O60563 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCNT1O60563 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CCNT1O60563 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CCNT1O60563 AC128676.1-201ENST00000454392 318 ntBASIC22.44■■□□□ 1.18
CCNT1O60563 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCNT1O60563 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNT1O60563 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CCNT1O60563 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNT1O60563 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNT1O60563 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNT1O60563 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNT1O60563 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.43■■□□□ 1.18
CCNT1O60563 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.43■■□□□ 1.18
CCNT1O60563 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.43■■□□□ 1.18
CCNT1O60563 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.43■■□□□ 1.18
CCNT1O60563 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNT1O60563 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.42■■□□□ 1.18
CCNT1O60563 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CCNT1O60563 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.42■■□□□ 1.18
CCNT1O60563 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCNT1O60563 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms