Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
LCMT2O60294 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.93■□□□□ 0.62
LCMT2O60294 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.93■□□□□ 0.62
LCMT2O60294 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.93■□□□□ 0.62
LCMT2O60294 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 AC009237.14-201ENST00000609975 1594 ntBASIC18.93■□□□□ 0.62
LCMT2O60294 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.92■□□□□ 0.62
LCMT2O60294 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LCMT2O60294 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.92■□□□□ 0.62
LCMT2O60294 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 AL121829.2-201ENST00000620908 328 ntBASIC18.92■□□□□ 0.62
LCMT2O60294 AC073648.6-201ENST00000641589 218 ntBASIC18.92■□□□□ 0.62
LCMT2O60294 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 AP001271.2-201ENST00000624018 1556 ntBASIC18.92■□□□□ 0.62
LCMT2O60294 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.92■□□□□ 0.62
LCMT2O60294 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.92■□□□□ 0.62
LCMT2O60294 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCMT2O60294 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
LCMT2O60294 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LCMT2O60294 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.91■□□□□ 0.62
LCMT2O60294 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 AC125437.2-201ENST00000625180 2167 ntBASIC18.91■□□□□ 0.62
LCMT2O60294 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LCMT2O60294 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 AC128676.1-201ENST00000454392 318 ntBASIC18.91■□□□□ 0.62
LCMT2O60294 FAM201B-201ENST00000458407 597 ntBASIC18.91■□□□□ 0.62
LCMT2O60294 AC069544.1-201ENST00000609399 999 ntBASIC18.91■□□□□ 0.62
LCMT2O60294 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.91■□□□□ 0.62
LCMT2O60294 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
LCMT2O60294 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCMT2O60294 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LCMT2O60294 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.9■□□□□ 0.62
LCMT2O60294 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.9■□□□□ 0.62
LCMT2O60294 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.9■□□□□ 0.62
LCMT2O60294 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.9■□□□□ 0.62
LCMT2O60294 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LCMT2O60294 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.9■□□□□ 0.62
LCMT2O60294 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.9■□□□□ 0.62
LCMT2O60294 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.9■□□□□ 0.62
LCMT2O60294 MTDHP1-201ENST00000605323 784 ntBASIC18.9■□□□□ 0.62
LCMT2O60294 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LCMT2O60294 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCMT2O60294 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LCMT2O60294 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
LCMT2O60294 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LCMT2O60294 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LCMT2O60294 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LCMT2O60294 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LCMT2O60294 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.89■□□□□ 0.61
LCMT2O60294 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.89■□□□□ 0.61
LCMT2O60294 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LCMT2O60294 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.89■□□□□ 0.61
LCMT2O60294 AL121906.2-201ENST00000621597 723 ntBASIC18.89■□□□□ 0.61
LCMT2O60294 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
LCMT2O60294 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
LCMT2O60294 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCMT2O60294 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 ABHD17AP1-201ENST00000358206 933 ntBASIC18.88■□□□□ 0.61
LCMT2O60294 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.88■□□□□ 0.61
LCMT2O60294 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms