Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.96■□□□□ 0.79
HTRA2O43464 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.96■□□□□ 0.79
HTRA2O43464 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTRA2O43464 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTRA2O43464 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HTRA2O43464 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTRA2O43464 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HTRA2O43464 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.95■□□□□ 0.78
HTRA2O43464 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.95■□□□□ 0.78
HTRA2O43464 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HTRA2O43464 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 AC098590.1-201ENST00000468126 897 ntBASIC19.95■□□□□ 0.78
HTRA2O43464 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.95■□□□□ 0.78
HTRA2O43464 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.95■□□□□ 0.78
HTRA2O43464 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HTRA2O43464 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.95■□□□□ 0.78
HTRA2O43464 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 TFP1-202ENST00000475455 1573 ntBASIC19.95■□□□□ 0.78
HTRA2O43464 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HTRA2O43464 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 AC018553.1-201ENST00000616682 1458 ntBASIC19.94■□□□□ 0.78
HTRA2O43464 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.94■□□□□ 0.78
HTRA2O43464 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.94■□□□□ 0.78
HTRA2O43464 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.94■□□□□ 0.78
HTRA2O43464 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
HTRA2O43464 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.94■□□□□ 0.78
HTRA2O43464 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.94■□□□□ 0.78
HTRA2O43464 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.94■□□□□ 0.78
HTRA2O43464 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.94■□□□□ 0.78
HTRA2O43464 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HTRA2O43464 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
HTRA2O43464 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.94■□□□□ 0.78
HTRA2O43464 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HTRA2O43464 TCF3P1-201ENST00000423021 1937 ntBASIC19.94■□□□□ 0.78
HTRA2O43464 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.94■□□□□ 0.78
HTRA2O43464 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HTRA2O43464 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HTRA2O43464 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.93■□□□□ 0.78
HTRA2O43464 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.93■□□□□ 0.78
HTRA2O43464 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HTRA2O43464 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.93■□□□□ 0.78
HTRA2O43464 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HTRA2O43464 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.93■□□□□ 0.78
HTRA2O43464 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HTRA2O43464 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
HTRA2O43464 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTRA2O43464 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.93■□□□□ 0.78
HTRA2O43464 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
HTRA2O43464 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
HTRA2O43464 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.92■□□□□ 0.78
HTRA2O43464 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HTRA2O43464 GCSHP5-201ENST00000443090 522 ntBASIC19.92■□□□□ 0.78
HTRA2O43464 AC133681.1-201ENST00000465482 601 ntBASIC19.92■□□□□ 0.78
HTRA2O43464 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HTRA2O43464 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.92■□□□□ 0.78
HTRA2O43464 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
HTRA2O43464 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HTRA2O43464 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTRA2O43464 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HTRA2O43464 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms