Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KRT87P-202ENST00000534226 1464 ntBASIC18.77■□□□□ 0.59
PDLIM1O00151 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM1O00151 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM1O00151 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM1O00151 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM1O00151 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM1O00151 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM1O00151 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDLIM1O00151 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM1O00151 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.76■□□□□ 0.59
PDLIM1O00151 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDLIM1O00151 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM1O00151 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM1O00151 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM1O00151 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM1O00151 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM1O00151 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM1O00151 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.75■□□□□ 0.59
PDLIM1O00151 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.75■□□□□ 0.59
PDLIM1O00151 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM1O00151 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM1O00151 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDLIM1O00151 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDLIM1O00151 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDLIM1O00151 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.74■□□□□ 0.59
PDLIM1O00151 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDLIM1O00151 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
PDLIM1O00151 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.74■□□□□ 0.59
PDLIM1O00151 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDLIM1O00151 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PDLIM1O00151 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDLIM1O00151 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PDLIM1O00151 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDLIM1O00151 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDLIM1O00151 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 AL133373.2-201ENST00000623187 2828 ntBASIC18.73■□□□□ 0.59
PDLIM1O00151 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PDLIM1O00151 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms