Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 BX664725.1-201ENST00000438252 379 ntBASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 MTDHP2-201ENST00000601468 714 ntBASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RBFOX3A6NFN3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 AP004607.4-201ENST00000530158 1459 ntBASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 AL354751.1-201ENST00000412768 1863 ntBASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 MIR3181-201ENST00000578512 73 ntBASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 AC092028.1-203ENST00000608262 953 ntBASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RBFOX3A6NFN3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 BICD1-207ENST00000551848 1962 ntBASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RBFOX3A6NFN3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RBFOX3A6NFN3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms