Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 AC006015.1-201ENST00000429970 570 ntBASIC19.72■□□□□ 0.75
CCDC189A1A4V9 KRT18P5-201ENST00000436075 1291 ntBASIC19.72■□□□□ 0.75
CCDC189A1A4V9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 AC016405.3-201ENST00000607710 860 ntBASIC19.72■□□□□ 0.75
CCDC189A1A4V9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC189A1A4V9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 DUX4L16-201ENST00000555130 1264 ntBASIC19.71■□□□□ 0.75
CCDC189A1A4V9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.71■□□□□ 0.75
CCDC189A1A4V9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC189A1A4V9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 AC068338.2-201ENST00000563278 1430 ntBASIC19.7■□□□□ 0.74
CCDC189A1A4V9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 AC016769.1-201ENST00000409132 1010 ntBASIC19.7■□□□□ 0.74
CCDC189A1A4V9 CNN2P6-201ENST00000439038 900 ntBASIC19.7■□□□□ 0.74
CCDC189A1A4V9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 AL049812.1-201ENST00000432563 2267 ntBASIC19.7■□□□□ 0.74
CCDC189A1A4V9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 AL356309.3-201ENST00000624132 1934 ntBASIC19.7■□□□□ 0.74
CCDC189A1A4V9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC189A1A4V9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.69■□□□□ 0.74
CCDC189A1A4V9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC189A1A4V9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms