Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 TREX1-205ENST00000625293 1783 ntBASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 NCF1B-203ENST00000435988 1254 ntBASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 MIR4758-201ENST00000577688 71 ntBASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV6-4A0A1B0GX49 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC007952.6-201ENST00000573168 2673 ntBASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC003957.1-201ENST00000625108 2673 ntBASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 DUSP5P2-201ENST00000426873 1033 ntBASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC005829.2-201ENST00000571422 1056 ntBASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 AL158211.5-201ENST00000623583 2518 ntBASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRBV6-4A0A1B0GX49 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms