Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AP006587.1-201ENST00000534129 1502 ntBASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AC009237.14-201ENST00000609975 1594 ntBASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 LINC01006-201ENST00000333319 2292 ntBASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AC124283.5-201ENST00000624661 1809 ntBASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 NBPF21P-201ENST00000425093 1451 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 YBX1P10-201ENST00000444752 975 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 UBE2SP1-201ENST00000450587 669 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 AC233263.1-201ENST00000578059 224 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 FAM197Y4-202ENST00000622692 608 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 AL023875.1-201ENST00000640777 796 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV25A0A0B4J276 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRAV25A0A0B4J276 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 KRASP1-201ENST00000407852 552 ntBASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 GCSHP5-201ENST00000443090 522 ntBASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 AC124016.1-201ENST00000609552 612 ntBASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 AL359736.2-201ENST00000621992 437 ntBASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV25A0A0B4J276 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms