Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 OFD1P3Y-201ENST00000453312 783 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 CCNJP2-201ENST00000457810 1163 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RPL7AP23-201ENST00000482625 776 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC091849.1-201ENST00000509920 121 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC016550.3-201ENST00000515706 767 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RNU6-334P-201ENST00000517072 102 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC022826.1-201ENST00000519383 805 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC068313.1-201ENST00000604028 1008 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AP000864.1-201ENST00000609424 650 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 MIR1264-201ENST00000616374 69 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC109809.1-201ENST00000619665 545 ntBASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB1Q9Y5F3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 AL627171.1-201ENST00000618845 1308 ntBASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PCDHB1Q9Y5F3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 RAD17P2-201ENST00000451754 1977 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AL391419.1-201ENST00000398901 1275 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 OR7E156P-201ENST00000400303 464 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AL389925.1-201ENST00000432257 728 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 RPS10P18-201ENST00000442662 495 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC098826.2-201ENST00000452011 651 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AL139156.3-201ENST00000454802 394 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SULT1D1P-201ENST00000458020 882 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 HMGB1P46-201ENST00000520062 610 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 C1DP5-201ENST00000525775 383 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SETP17-201ENST00000534163 817 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC011921.2-201ENST00000589465 152 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC068620.3-201ENST00000602749 560 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AL137246.2-201ENST00000613439 662 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC010608.3-201ENST00000625048 527 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC004808.1-201ENST00000627671 721 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC099654.9-201ENST00000637055 678 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF101P1-201ENST00000435701 1720 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC119674.1-202ENST00000641333 1860 ntBASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHB1Q9Y5F3 AC061975.7-201ENST00000592016 2692 ntBASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDHB1Q9Y5F3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms