Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 RN7SKP69-201ENST00000365390 305 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 RNA5SP284-201ENST00000384547 118 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AL096829.1-201ENST00000413677 457 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AL354890.1-201ENST00000413730 346 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 TPTE2P1-204ENST00000435256 593 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 NDUFS5P5-201ENST00000437256 321 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC018638.3-201ENST00000461273 132 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC007998.1-201ENST00000474156 672 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC026254.2-201ENST00000475295 371 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC092121.1-201ENST00000569452 202 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 MIR6793-201ENST00000612376 63 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC002044.3-201ENST00000623314 541 ntBASIC6.44□□□□□ -1.38
YIPF1Q9Y548 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
YIPF1Q9Y548 AC092821.2-201ENST00000545710 2042 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC105749.1-201ENST00000631338 2008 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC068733.2-201ENST00000605434 1418 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AP001541.1-201ENST00000623322 1904 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 RNU6-167P-201ENST00000384292 106 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 RPL12P12-201ENST00000424633 501 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 YY1P1-201ENST00000427625 668 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 MTND6P12-201ENST00000428247 522 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC011742.2-201ENST00000443818 352 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC092865.4-201ENST00000477936 615 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 MTATP6P1-201ENST00000514057 681 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 RNU4ATAC-201ENST00000580972 127 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC005244.1-201ENST00000582566 339 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC141002.1-201ENST00000607025 279 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AC119674.1-202ENST00000641333 1860 ntBASIC6.43□□□□□ -1.38
YIPF1Q9Y548 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 AL117339.4-201ENST00000608335 7063 ntBASIC6.42□□□□□ -1.38
YIPF1Q9Y548 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YIPF1Q9Y548 OR52B3P-201ENST00000314715 928 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms