Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC066616.2-201ENST00000559334 1481 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC092999.1-201ENST00000624004 1924 ntBASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 AC099654.3-201ENST00000447087 1546 ntBASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PDZRN3Q9UPQ7 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SKP63-201ENST00000363187 301 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 BTF3P7-201ENST00000407097 488 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SKP131-201ENST00000410698 301 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RPL34P19-201ENST00000415903 342 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL390840.1-201ENST00000420303 988 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC092393.1-201ENST00000439625 742 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 USP9YP8-201ENST00000441913 500 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC112653.1-201ENST00000443851 386 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 NDUFAF4P2-201ENST00000445374 520 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 MTND1P11-201ENST00000456661 876 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC005550.2-201ENST00000476382 318 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL152P-201ENST00000484176 298 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC092349.1-201ENST00000504903 310 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 GAPDHP61-201ENST00000507324 1005 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 PTGES3P3-201ENST00000511479 482 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC046134.1-201ENST00000514454 666 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 DUXAP2-201ENST00000519198 589 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 OR5AK3P-201ENST00000527486 1297 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC022832.1-201ENST00000530718 645 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 EGLN3P1-201ENST00000541727 720 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL426P-201ENST00000579106 295 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL031601.1-201ENST00000605702 394 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL008582.1-201ENST00000609612 442 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC097505.1-201ENST00000610199 565 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC008498.1-201ENST00000613012 531 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC245407.2-201ENST00000614199 451 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AC138207.6-201ENST00000579164 1967 ntBASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC9.46□□□□□ -0.9
PDZRN3Q9UPQ7 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC027279.4-201ENST00000624371 2072 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 SNORA63-201ENST00000363450 132 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 RPL5P5-201ENST00000392009 893 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 SMARCE1P1-201ENST00000417747 1186 ntBASIC9.45□□□□□ -0.9
PDZRN3Q9UPQ7 AC007064.3-201ENST00000422608 359 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms