Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC078880.4-201ENST00000617627 1749 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 RN7SKP162-201ENST00000363605 345 ntBASIC7.65□□□□□ -1.18
SCN11AQ9UI33 OR2AT2P-201ENST00000413438 905 ntBASIC7.65□□□□□ -1.18
SCN11AQ9UI33 OR5W1P-201ENST00000423705 938 ntBASIC7.65□□□□□ -1.18
SCN11AQ9UI33 AL662874.1-201ENST00000426065 230 ntBASIC7.65□□□□□ -1.18
SCN11AQ9UI33 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCN11AQ9UI33 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 AL031651.1-201ENST00000615357 1438 ntBASIC7.65□□□□□ -1.19
SCN11AQ9UI33 AL353763.1-201ENST00000624467 1628 ntBASIC7.65□□□□□ -1.19
SCN11AQ9UI33 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SCN11AQ9UI33 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 U3.2-201ENST00000362981 210 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC079922.1-201ENST00000443291 359 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC008410.1-201ENST00000483777 339 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC006499.3-201ENST00000506077 748 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 MIR1273E-201ENST00000581165 102 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AL359922.2-201ENST00000581788 3017 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AL353626.3-201ENST00000413399 657 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 DEFA9P-201ENST00000433042 285 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 Z84478.1-201ENST00000438230 1219 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC022404.1-201ENST00000555320 273 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 OR7A1P-201ENST00000601206 970 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC079395.2-201ENST00000610982 737 ntBASIC7.64□□□□□ -1.19
SCN11AQ9UI33 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.64□□□□□ -1.19
SCN11AQ9UI33 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 SIAH1P1-201ENST00000479411 923 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 RPL38P3-201ENST00000484463 213 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 ATP5LP3-201ENST00000514223 304 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 GARSP1-201ENST00000570895 719 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 IMMP1LP3-201ENST00000604197 224 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AC092111.1-201ENST00000618256 3358 ntBASIC7.63□□□□□ -1.19
SCN11AQ9UI33 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SCN11AQ9UI33 AC123769.1-201ENST00000530992 3192 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms