Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.88□□□□□ -0.99
USP35Q9P2H5 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
USP35Q9P2H5 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 GSTA6P-201ENST00000424144 582 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 MTCO1P51-201ENST00000427672 1060 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 MTND4LP14-201ENST00000429447 288 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 MTCO1P45-201ENST00000431457 267 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 PNKDP1-201ENST00000435914 430 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC009963.3-201ENST00000458090 486 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 RPL37AP8-201ENST00000494116 276 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 RBBP4P1-201ENST00000502424 1276 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 SUMO2P19-201ENST00000518920 295 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 CYCSP25-201ENST00000525280 316 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 RPL3P13-201ENST00000550415 216 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC026898.1-201ENST00000586404 571 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC073488.9-201ENST00000631601 754 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC103703.1-201ENST00000634783 663 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC022034.1-201ENST00000512867 2156 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC116158.1-201ENST00000560231 2129 ntBASIC8.87□□□□□ -0.99
USP35Q9P2H5 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
USP35Q9P2H5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
USP35Q9P2H5 FO082842.1-201ENST00000423552 1370 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC091305.2-201ENST00000624049 1576 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC022613.3-201ENST00000560740 1346 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 FUNDC2P3-201ENST00000334716 533 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AL031985.1-201ENST00000392713 418 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC079355.1-201ENST00000421770 223 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR2L9P-201ENST00000444456 913 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC010240.2-201ENST00000445363 1205 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 RWDD4P1-201ENST00000488019 565 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 SNX18P24-201ENST00000505249 671 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 RNA5SP418-201ENST00000515951 117 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 AC023827.2-201ENST00000566880 1061 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR51C1P-201ENST00000608504 942 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 CASC19-246ENST00000641625 1606 ntBASIC8.86□□□□□ -0.99
USP35Q9P2H5 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
USP35Q9P2H5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
USP35Q9P2H5 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USP35Q9P2H5 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
USP35Q9P2H5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 284.8 ms