Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC079753.1-201ENST00000623243 3868 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC119674.1-213ENST00000641177 1386 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC105749.1-201ENST00000631338 2008 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AL355834.1-201ENST00000556602 3965 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RN7SKP206-201ENST00000410823 293 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RPL12P12-201ENST00000424633 501 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 VN1R53P-201ENST00000429536 957 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 MYL6P3-201ENST00000436904 432 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RPL23AP28-201ENST00000448062 470 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AKR1D1P1-201ENST00000457236 936 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 RARRES2P3-201ENST00000457739 473 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 SLC25A51P1-201ENST00000468432 871 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 HMGN1P16-201ENST00000508308 283 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 MTCYBP44-201ENST00000514835 823 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 SNORA70.11-201ENST00000515987 138 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 SNORA70.13-201ENST00000516116 138 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC122713.1-201ENST00000518368 1015 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC140063.1-201ENST00000541343 259 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC008521.2-201ENST00000591021 259 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 AC010325.3-201ENST00000641084 394 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM4Q9C037 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM4Q9C037 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 CASC19-260ENST00000641828 2001 ntBASIC6.37□□□□□ -1.39
TRIM4Q9C037 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 RARSP1-201ENST00000542842 1418 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 SAMM50P1-201ENST00000455403 1399 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 RNA5SP65-201ENST00000363166 119 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM4Q9C037 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 PSMA6P1-201ENST00000400275 741 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 PRELID1P1-201ENST00000403549 660 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC096537.2-201ENST00000413707 714 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 SUMO2P1-206ENST00000445436 284 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM4Q9C037 RN7SL382P-201ENST00000482631 282 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 RN7SL101P-201ENST00000496350 279 ntBASIC6.36□□□□□ -1.39
TRIM4Q9C037 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms