Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC018892.2-201ENST00000457656 693 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 RN7SL152P-201ENST00000484176 298 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AL079303.1-201ENST00000486611 463 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC010374.1-201ENST00000503762 1237 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 HPRT1P1-201ENST00000509498 657 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR51A1P-201ENST00000511110 946 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR5BM1P-201ENST00000512021 366 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 HMGB1P46-201ENST00000520062 610 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR5M4P-201ENST00000529436 925 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC027807.1-201ENST00000559921 996 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC061975.3-201ENST00000583209 244 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR7E19P-202ENST00000589942 844 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 VN1R81P-201ENST00000602085 372 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AL591222.2-201ENST00000604443 754 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC121247.2-201ENST00000604776 136 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 HMGB1P51-201ENST00000605166 638 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AL683813.2-201ENST00000605245 502 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC135507.1-201ENST00000607214 561 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC244100.4-201ENST00000617747 388 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC090897.3-201ENST00000636973 1157 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 AC122713.2-201ENST00000624942 3335 ntBASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
FOXP3Q9BZS1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 AC105114.1-201ENST00000624795 1862 ntBASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
FOXP3Q9BZS1 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 Y_RNA.201-201ENST00000364052 96 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 RNU4-24P-201ENST00000364565 139 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 SNORA70.8-201ENST00000384231 136 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC090114.1-201ENST00000393266 448 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AP002784.2-201ENST00000397300 549 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 MRPL32P1-201ENST00000406301 247 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 RPSAP60-201ENST00000415403 880 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 RPL12P43-201ENST00000420608 499 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 ARAFP1-201ENST00000422172 605 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 CYP4F34P-201ENST00000425951 481 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AL390023.1-201ENST00000428836 262 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AL365396.1-201ENST00000430854 671 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 PA2G4P1-201ENST00000442248 1197 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC073072.2-201ENST00000447425 348 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 SNORA81.1-201ENST00000458922 177 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC147055.3-201ENST00000510547 851 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC011352.1-201ENST00000512300 793 ntBASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.21□□□□□ -1.26
FOXP3Q9BZS1 AC010306.1-201ENST00000523223 1117 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms