Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.84□□□□□ -1.15
ABCA3Q99758 AC244502.2-201ENST00000543361 851 ntBASIC7.84□□□□□ -1.15
ABCA3Q99758 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.84□□□□□ -1.15
ABCA3Q99758 AL049872.1-201ENST00000556323 322 ntBASIC7.84□□□□□ -1.15
ABCA3Q99758 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.84□□□□□ -1.15
ABCA3Q99758 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
ABCA3Q99758 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.84□□□□□ -1.15
ABCA3Q99758 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
ABCA3Q99758 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
ABCA3Q99758 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 MFSD8-217ENST00000641178 4374 ntBASIC7.84□□□□□ -1.15
ABCA3Q99758 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ABCA3Q99758 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 ELOCP3-201ENST00000439303 348 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 AC073850.1-201ENST00000449243 255 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 RPL38P3-201ENST00000484463 213 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.83□□□□□ -1.16
ABCA3Q99758 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.83□□□□□ -1.16
ABCA3Q99758 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.83□□□□□ -1.16
ABCA3Q99758 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 AL161912.4-201ENST00000623889 2468 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.83□□□□□ -1.16
ABCA3Q99758 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
ABCA3Q99758 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.83□□□□□ -1.16
ABCA3Q99758 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
ABCA3Q99758 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 MAPK10-323ENST00000641493 3207 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
ABCA3Q99758 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.83□□□□□ -1.16
ABCA3Q99758 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.83□□□□□ -1.16
ABCA3Q99758 AL645937.3-201ENST00000453647 936 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 OR13C1P-201ENST00000457612 963 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.83□□□□□ -1.16
ABCA3Q99758 AC073916.1-201ENST00000545095 130 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 OR11J2P-201ENST00000555298 907 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
ABCA3Q99758 AC137056.2-201ENST00000624055 1958 ntBASIC7.83□□□□□ -1.16
ABCA3Q99758 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
ABCA3Q99758 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ABCA3Q99758 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
ABCA3Q99758 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
ABCA3Q99758 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.82□□□□□ -1.16
ABCA3Q99758 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.82□□□□□ -1.16
ABCA3Q99758 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.82□□□□□ -1.16
ABCA3Q99758 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.82□□□□□ -1.16
ABCA3Q99758 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.82□□□□□ -1.16
ABCA3Q99758 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.82□□□□□ -1.16
ABCA3Q99758 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.82□□□□□ -1.16
ABCA3Q99758 AC126177.5-201ENST00000549599 178 ntBASIC7.82□□□□□ -1.16
ABCA3Q99758 AC106730.2-201ENST00000566641 540 ntBASIC7.82□□□□□ -1.16
ABCA3Q99758 RBM22P12-201ENST00000567098 1255 ntBASIC7.82□□□□□ -1.16
ABCA3Q99758 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
ABCA3Q99758 MIR3691-201ENST00000578066 90 ntBASIC7.82□□□□□ -1.16
ABCA3Q99758 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
ABCA3Q99758 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
ABCA3Q99758 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.82□□□□□ -1.16
ABCA3Q99758 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC7.81□□□□□ -1.16
ABCA3Q99758 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
ABCA3Q99758 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
ABCA3Q99758 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
ABCA3Q99758 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
ABCA3Q99758 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC7.81□□□□□ -1.16
ABCA3Q99758 AC105749.1-201ENST00000631338 2008 ntBASIC7.81□□□□□ -1.16
ABCA3Q99758 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
ABCA3Q99758 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
ABCA3Q99758 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
ABCA3Q99758 MIR133B-201ENST00000362210 119 ntBASIC7.81□□□□□ -1.16
ABCA3Q99758 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
ABCA3Q99758 MIR223-201ENST00000385204 110 ntBASIC7.81□□□□□ -1.16
ABCA3Q99758 RNU1-77P-201ENST00000390868 162 ntBASIC7.81□□□□□ -1.16
ABCA3Q99758 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.81□□□□□ -1.16
ABCA3Q99758 RPL15P21-201ENST00000495592 567 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms