Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 FO082842.1-201ENST00000423552 1370 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 TMEM75-201ENST00000624314 2165 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC018765.1-201ENST00000623357 3446 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
IFT140Q96RY7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AL133173.1-201ENST00000423458 397 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 FTH1P20-201ENST00000434913 548 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC021074.2-201ENST00000468434 172 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 RPS29P22-201ENST00000472363 168 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC095057.1-201ENST00000507583 168 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 MIR4646-201ENST00000580775 63 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC011815.2-201ENST00000618230 2021 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 AC116631.1-202ENST00000640984 683 ntBASIC9.85□□□□□ -0.83
IFT140Q96RY7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 AP001541.1-201ENST00000623322 1904 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 AC105114.1-201ENST00000624795 1862 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 RPL7L1P9-201ENST00000431298 745 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 GSTA7P-201ENST00000438425 448 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 RPL23AP60-201ENST00000450011 454 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 AL450023.1-201ENST00000450868 751 ntBASIC9.84□□□□□ -0.83
IFT140Q96RY7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.84□□□□□ -0.83
IFT140Q96RY7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
IFT140Q96RY7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 EEF1A1P30-201ENST00000429708 1315 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 SRSF1P1-201ENST00000424058 520 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 AC099677.3-201ENST00000427081 395 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 RAB28P2-201ENST00000454299 641 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 OR7E158P-201ENST00000524483 910 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 AC145423.1-201ENST00000605712 336 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 AC126915.2-201ENST00000610957 190 ntBASIC9.83□□□□□ -0.84
IFT140Q96RY7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
IFT140Q96RY7 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
IFT140Q96RY7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
IFT140Q96RY7 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
IFT140Q96RY7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 OR2W4P-201ENST00000406496 926 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 EIF2S2P3-201ENST00000428356 999 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
IFT140Q96RY7 RPS23P9-201ENST00000448848 438 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 OR7A15P-201ENST00000449848 1009 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 AC126177.5-201ENST00000549599 178 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 AC015818.6-201ENST00000584274 634 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 uc_338.18-201ENST00000615451 175 ntBASIC9.82□□□□□ -0.84
IFT140Q96RY7 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC9.82□□□□□ -0.84
IFT140Q96RY7 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms