Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF31Q96EP0 AC010401.2-201ENST00000575137 4934 ntBASIC6.42□□□□□ -1.38
RNF31Q96EP0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF31Q96EP0 AL136531.3-201ENST00000624378 3658 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC006600.2-201ENST00000624834 2506 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 CDY7P-201ENST00000429883 1604 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 RNU6-316P-201ENST00000391027 107 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 RNU11-6P-201ENST00000391127 133 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 YWHAZP4-201ENST00000392459 708 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC003045.1-201ENST00000398779 713 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 GAPDHP57-201ENST00000424400 585 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 GAPDHP19-201ENST00000431768 1005 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 OR6R1P-201ENST00000431838 940 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 CETN4P-201ENST00000432407 469 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL392003.1-201ENST00000434394 243 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 MTND1P31-201ENST00000449206 961 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 RPS4XP23-201ENST00000487801 237 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 RN7SL104P-201ENST00000498686 293 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC010468.3-201ENST00000508225 458 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AP001636.2-201ENST00000525517 696 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC121758.1-202ENST00000556917 658 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 VN1R87P-201ENST00000596706 487 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL049840.6-201ENST00000604583 345 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC087683.2-201ENST00000611384 326 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC074276.2-201ENST00000619891 348 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 AC132825.8-201ENST00000640783 297 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 AL121936.2-201ENST00000641935 662 ntBASIC6.41□□□□□ -1.38
RNF31Q96EP0 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF31Q96EP0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF31Q96EP0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 RPL31P11-201ENST00000426558 1558 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 RN7SKP187-201ENST00000365536 330 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 VN1R12P-201ENST00000403778 876 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 MTCO2P23-201ENST00000425216 680 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF31Q96EP0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 AC099063.2-201ENST00000446360 662 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 MTCO2P6-201ENST00000463134 685 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF31Q96EP0 RPS14P8-201ENST00000478778 369 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 AC005017.1-201ENST00000482002 490 ntBASIC6.4□□□□□ -1.38
RNF31Q96EP0 DEFB109A-201ENST00000482450 265 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms