Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AC106730.3-201ENST00000624568 641 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AL596275.2-207ENST00000641188 675 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC006213.6-201ENST00000623722 4179 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 Z95114.1-201ENST00000624264 14574 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 RPL11P4-201ENST00000332269 436 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 SNORD8-201ENST00000363915 110 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 RNA5SP485-201ENST00000365053 119 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC099535.1-201ENST00000408928 371 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 CR848007.2-201ENST00000424918 787 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 MTCO3P43-201ENST00000440974 771 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 GTF2IP14-201ENST00000441415 586 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AL355355.1-201ENST00000442900 793 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 RPL19P11-201ENST00000495944 589 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC008429.2-201ENST00000523057 864 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC011891.2-201ENST00000604949 397 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC018692.2-201ENST00000624130 348 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 AC063952.1-203ENST00000634410 658 ntBASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.69□□□□□ -1.18
CHMP4CQ96CF2 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 RNU4-64P-201ENST00000410795 131 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 RPL23AP85-201ENST00000421838 433 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AL645939.3-201ENST00000435408 225 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 CLNS1AP1-201ENST00000435954 682 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 SNX18P26-201ENST00000458433 740 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC117394.1-201ENST00000477323 567 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC005017.1-201ENST00000482002 490 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 RNA5SP473-201ENST00000516402 125 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC104997.1-201ENST00000519761 717 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 KCTD9P6-201ENST00000522306 950 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC011497.2-201ENST00000600255 639 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 AC015802.5-201ENST00000607478 399 ntBASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4CQ96CF2 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms