Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC073488.3-201ENST00000631611 778 ntBASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHROOM3Q8TF72 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 UBE2V1P14-201ENST00000415815 558 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 PNKDP1-201ENST00000435914 430 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 SOCS5P1-201ENST00000440415 949 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC112187.1-201ENST00000455837 479 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL512624.1-201ENST00000613638 469 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC069234.4-201ENST00000621276 412 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 FO681491.1-202ENST00000623392 737 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 RNA5SP443-201ENST00000363083 132 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL391361.1-201ENST00000405580 489 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC015977.1-201ENST00000418887 292 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL627308.1-201ENST00000435693 821 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AL355032.1-201ENST00000472981 438 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 RPL12P31-201ENST00000478433 450 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 CR383658.1-201ENST00000514609 734 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AP006245.2-201ENST00000522004 300 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC027369.2-201ENST00000528030 440 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 AC024651.2-201ENST00000562480 2098 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 HSPD1P8-201ENST00000400121 1658 ntBASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM3Q8TF72 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CUBNP2-201ENST00000443534 1139 ntBASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 AC027334.1-201ENST00000603257 310 ntBASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
SHROOM3Q8TF72 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms