Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNED1Q8TER0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 U3.7-201ENST00000363668 216 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 RN7SL72P-201ENST00000460697 269 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL133445.1-201ENST00000467051 452 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 SIAH1P1-201ENST00000479411 923 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 RN7SL826P-201ENST00000479724 288 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 IGLV3-30-201ENST00000524362 298 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 MAPK10-371ENST00000641952 5209 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 AC127024.8-201ENST00000623719 2094 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 RNA5SP234-201ENST00000363916 119 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 UBE2V1P14-201ENST00000415815 558 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL445928.1-201ENST00000435545 222 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 EEF1B2P6-201ENST00000445713 673 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 OR4A46P-201ENST00000527255 933 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 AL691477.1-201ENST00000624398 162 ntBASIC7.35□□□□□ -1.23
SNED1Q8TER0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.35□□□□□ -1.23
SNED1Q8TER0 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNED1Q8TER0 PABPC1P6-201ENST00000445594 1829 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 OFD1P17-201ENST00000437639 3018 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AL031651.1-201ENST00000615357 1438 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 RNA5SP183-201ENST00000362452 119 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 RNA5SP350-201ENST00000363298 111 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 NMD3P2-201ENST00000421815 761 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 GAPDHP58-201ENST00000438477 1006 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 RN7SL184P-201ENST00000488308 297 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC093763.2-201ENST00000505334 1223 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AC119403.2-201ENST00000590960 598 ntBASIC7.34□□□□□ -1.23
SNED1Q8TER0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.34□□□□□ -1.23
SNED1Q8TER0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SNED1Q8TER0 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
SNED1Q8TER0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
SNED1Q8TER0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SNED1Q8TER0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms