Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 AP002370.1-201ENST00000528055 1602 ntBASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3CQ6NXT2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 MAPK10-287ENST00000641217 3037 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL133243.2-201ENST00000610331 1621 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 SNORA70H-201ENST00000383910 135 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 SNORA70J-201ENST00000384182 135 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 SNORA51.9-201ENST00000384295 124 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP144-201ENST00000411108 279 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 PPIAP10-201ENST00000438675 458 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 DNAJC19P5-201ENST00000443295 316 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 RPL6P30-201ENST00000443382 862 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 PPIAP27-201ENST00000453800 265 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 PPIAP7-201ENST00000454070 489 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 SNX18P26-201ENST00000458433 740 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC090958.1-201ENST00000511122 351 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AP000620.1-201ENST00000527147 504 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 OR4A6P-201ENST00000534364 970 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC009120.3-201ENST00000563335 499 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC011497.2-201ENST00000600255 639 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL591167.1-201ENST00000607321 456 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AC092266.1-201ENST00000610958 165 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL136097.3-201ENST00000611097 505 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 MIR6861-201ENST00000618657 64 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AL132656.3-201ENST00000606384 1595 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 LYARP1-201ENST00000436977 1501 ntBASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
H3F3CQ6NXT2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 RNU1-49P-201ENST00000363468 159 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC004386.1-201ENST00000393214 761 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 AC130360.1-201ENST00000425489 1117 ntBASIC5.78□□□□□ -1.48
H3F3CQ6NXT2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms