Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MTND4P3-201ENST00000417829 541 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 KCTD9P3-201ENST00000434597 1169 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC128677.1-201ENST00000436016 442 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 RNU6-956P-201ENST00000458868 103 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 SNORA81.1-201ENST00000458922 177 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC098799.2-201ENST00000509466 868 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AP005902.2-201ENST00000518393 307 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 OR5AL2P-201ENST00000532185 920 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC244034.2-201ENST00000562504 509 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC068802.1-201ENST00000603420 732 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC022079.2-201ENST00000619739 566 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC099654.14-201ENST00000638599 341 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AL139254.2-202ENST00000641937 1156 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 OFD1P8Y-201ENST00000449148 1433 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 HERC2P8-202ENST00000564334 3705 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 APP-209ENST00000440126 2846 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC136624.1-201ENST00000400791 413 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 PGBD4P8-201ENST00000412993 562 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 USP12PX-201ENST00000432383 1057 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 FGF7P5-201ENST00000441829 291 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 RPL5P32-201ENST00000454085 879 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 RPL23P10-201ENST00000468780 412 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 RPS3AP49-201ENST00000472161 790 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC008967.1-201ENST00000504843 163 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 NDUFB4P12-201ENST00000513465 390 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 FABP5P5-201ENST00000515537 406 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 MTCYBP19-201ENST00000517463 1124 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AKIRIN1P1-201ENST00000547384 544 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 MIR378C-201ENST00000578683 81 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC005242.1-201ENST00000585658 438 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC011447.2-201ENST00000592921 283 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC090181.2-201ENST00000602975 672 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 OR2BH1P-201ENST00000608850 864 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 Z99129.1-201ENST00000612510 255 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC093838.1-201ENST00000613014 469 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC245060.6-201ENST00000624350 8420 ntBASIC9.1□□□□□ -0.95
RC3H1Q5TC82 AC013268.3-201ENST00000262716 2324 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms