Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC023245.2-201ENST00000530760 2978 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AL512353.3-201ENST00000417517 1326 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC010401.2-201ENST00000575137 4934 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC116158.1-201ENST00000560231 2129 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 DDX18P6-201ENST00000450119 1997 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 SNORA38B-201ENST00000363524 131 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 MEAF6P1-201ENST00000416092 327 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 FAR1P1-201ENST00000427163 934 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 RPL3P11-201ENST00000434028 1146 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 GAPDHP20-201ENST00000444107 1007 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 RNU6-491P-201ENST00000516099 110 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 SCARNA11.1-201ENST00000516918 132 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC073916.1-201ENST00000545095 130 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AL162632.2-201ENST00000553933 399 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ANP32BP1-202ENST00000568553 737 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 MIR3908-201ENST00000579798 126 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AL512430.4-201ENST00000603085 613 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 MIR6774-201ENST00000614651 70 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC027506.1-201ENST00000621395 198 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC127071.2-201ENST00000623293 527 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC105235.1-201ENST00000623208 1816 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC38Q502W7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CCDC38Q502W7 MTCO1P28-201ENST00000574177 1528 ntBASIC6.66□□□□□ -1.34
CCDC38Q502W7 AC024341.1-201ENST00000526444 1552 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC38Q502W7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC38Q502W7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC38Q502W7 SNORA27.3-201ENST00000364937 134 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 AL360271.1-201ENST00000395679 510 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC38Q502W7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 TMA16P2-201ENST00000413187 601 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 OR52N3P-201ENST00000413417 934 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 SETP10-201ENST00000424368 814 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 MTND4P15-201ENST00000437913 1033 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 BX679664.2-201ENST00000439282 283 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AL845321.1-201ENST00000444603 348 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC38Q502W7 SLAMF6P1-201ENST00000451067 602 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 STRADBP1-201ENST00000478954 1281 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 PCNAP1-201ENST00000505363 709 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 OR4V1P-201ENST00000525394 1140 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AP002004.1-206ENST00000532441 876 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 DIMT1P1-201ENST00000603970 763 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 HMGB1P51-201ENST00000605166 638 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC38Q502W7 AP001264.1-201ENST00000620602 703 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 LINC00216-201ENST00000623548 1126 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms