Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHROOM1Q2M3G4 MTND5P12-201ENST00000502851 1449 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AC005618.1-201ENST00000606901 3148 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 MIR433-201ENST00000384837 93 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 BX284632.2-201ENST00000421091 399 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AC242426.1-201ENST00000435270 960 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AL512605.1-202ENST00000441919 381 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AP000281.1-201ENST00000444036 316 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AL359955.2-201ENST00000445380 353 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 RPL31P15-201ENST00000449770 338 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 SNX18P26-201ENST00000458433 740 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AP003396.4-201ENST00000527574 265 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 AL645933.2-201ENST00000606743 1207 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 RAD17P2-201ENST00000451754 1977 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 FO082842.1-201ENST00000423552 1370 ntBASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SHROOM1Q2M3G4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC110373.1-201ENST00000505994 3505 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 VN1R110P-201ENST00000438988 971 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AL161636.2-201ENST00000445179 927 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AP006222.1-205ENST00000450734 457 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ACA64.1-201ENST00000459171 127 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 IGLV3-30-201ENST00000524362 298 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 SETP3-201ENST00000581726 813 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC090236.2-201ENST00000587933 1101 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC011445.2-201ENST00000599274 173 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 MIR6793-201ENST00000612376 63 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC127024.6-201ENST00000621598 424 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AC022726.2-201ENST00000634673 547 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 MIR4302-201ENST00000638058 60 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 HDAC1P2-201ENST00000453661 1398 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 MTCO1P11-201ENST00000429111 1528 ntBASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SHROOM1Q2M3G4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms