Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL450270.1-201ENST00000606160 391 ntBASIC6.05□□□□□ -1.44
RAE1P78406 AC068726.1-201ENST00000610993 341 ntBASIC6.05□□□□□ -1.44
RAE1P78406 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
RAE1P78406 AP003499.2-201ENST00000624100 483 ntBASIC6.05□□□□□ -1.44
RAE1P78406 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 OR5M2P-202ENST00000641241 4242 ntBASIC6.05□□□□□ -1.44
RAE1P78406 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.05□□□□□ -1.44
RAE1P78406 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAE1P78406 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.05□□□□□ -1.44
RAE1P78406 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 AOX3P-204ENST00000491025 2107 ntBASIC6.04□□□□□ -1.44
RAE1P78406 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 AC092692.1-201ENST00000623625 2595 ntBASIC6.04□□□□□ -1.44
RAE1P78406 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 RNU6-1331P-201ENST00000363658 106 ntBASIC6.04□□□□□ -1.44
RAE1P78406 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RAE1P78406 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 TRIM60P17-201ENST00000415181 719 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.04□□□□□ -1.44
RAE1P78406 AL121882.1-201ENST00000422893 417 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 ARL5AP3-201ENST00000439327 386 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC234771.4-201ENST00000441416 730 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.04□□□□□ -1.44
RAE1P78406 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.04□□□□□ -1.44
RAE1P78406 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.04□□□□□ -1.44
RAE1P78406 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.04□□□□□ -1.44
RAE1P78406 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 AC131935.1-201ENST00000524621 333 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 OR4H6P-201ENST00000563771 921 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AL158211.1-201ENST00000566763 763 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.04□□□□□ -1.44
RAE1P78406 AL589863.1-201ENST00000595383 631 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AL591222.2-201ENST00000604443 754 ntBASIC6.04□□□□□ -1.44
RAE1P78406 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 U91328.4-201ENST00000608919 517 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.04□□□□□ -1.44
RAE1P78406 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RAE1P78406 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.04□□□□□ -1.44
RAE1P78406 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC091046.2-201ENST00000620775 665 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AP000943.4-201ENST00000622912 357 ntBASIC6.04□□□□□ -1.44
RAE1P78406 AC135068.11-201ENST00000636378 921 ntBASIC6.04□□□□□ -1.44
RAE1P78406 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RAE1P78406 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RAE1P78406 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.04□□□□□ -1.44
RAE1P78406 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAE1P78406 LCOR-201ENST00000286067 4542 ntBASIC6.04□□□□□ -1.44
RAE1P78406 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 CASC19-238ENST00000641523 1558 ntBASIC6.03□□□□□ -1.44
RAE1P78406 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 AC125238.2-201ENST00000430003 1440 ntBASIC6.03□□□□□ -1.44
RAE1P78406 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 LCN1P2-201ENST00000372030 223 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AL359885.1-201ENST00000415786 903 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAE1P78406 MTND4P24-201ENST00000424002 397 ntBASIC6.03□□□□□ -1.44
RAE1P78406 RNF19BPX-201ENST00000426224 625 ntBASIC6.03□□□□□ -1.44
RAE1P78406 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 AC007000.2-201ENST00000442564 487 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.03□□□□□ -1.44
RAE1P78406 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.03□□□□□ -1.44
RAE1P78406 RPL23AP73-201ENST00000492507 471 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AC010468.3-201ENST00000508225 458 ntBASIC6.03□□□□□ -1.44
RAE1P78406 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.03□□□□□ -1.44
RAE1P78406 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms