Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
MRE11P49959 GABARAPL3-201ENST00000412799 354 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 AL139158.1-201ENST00000424719 340 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC244033.1-201ENST00000426826 870 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.59□□□□□ -1.19
MRE11P49959 RPSAP32-201ENST00000432681 526 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AL645638.1-201ENST00000440519 361 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC245291.3-201ENST00000443400 292 ntBASIC7.59□□□□□ -1.19
MRE11P49959 RAD1P2-201ENST00000446414 663 ntBASIC7.59□□□□□ -1.19
MRE11P49959 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.59□□□□□ -1.19
MRE11P49959 AC002075.1-201ENST00000457396 676 ntBASIC7.59□□□□□ -1.19
MRE11P49959 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.59□□□□□ -1.19
MRE11P49959 AC015908.1-201ENST00000478739 476 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC108729.1-201ENST00000487812 947 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC104109.1-201ENST00000498563 436 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 AC110056.1-201ENST00000525759 911 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.59□□□□□ -1.19
MRE11P49959 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 MIR5682-201ENST00000584864 76 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AC025171.4-201ENST00000607250 1047 ntBASIC7.59□□□□□ -1.19
MRE11P49959 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 AC026124.2-201ENST00000621847 656 ntBASIC7.59□□□□□ -1.19
MRE11P49959 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.59□□□□□ -1.19
MRE11P49959 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 CASC19-274ENST00000642018 970 ntBASIC7.59□□□□□ -1.19
MRE11P49959 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 AL356361.1-201ENST00000400943 1459 ntBASIC7.59□□□□□ -1.19
MRE11P49959 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 CASC19-228ENST00000641414 1684 ntBASIC7.59□□□□□ -1.19
MRE11P49959 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
MRE11P49959 MAPK10-287ENST00000641217 3037 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
MRE11P49959 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.59□□□□□ -1.2
MRE11P49959 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 AC053481.2-202ENST00000582394 1500 ntBASIC7.58□□□□□ -1.2
MRE11P49959 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
MRE11P49959 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.58□□□□□ -1.2
MRE11P49959 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
MRE11P49959 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
MRE11P49959 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 DHFRP5-201ENST00000406944 564 ntBASIC7.58□□□□□ -1.2
MRE11P49959 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.58□□□□□ -1.2
MRE11P49959 AL355143.1-201ENST00000407101 841 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AL023284.3-201ENST00000407767 334 ntBASIC7.58□□□□□ -1.2
MRE11P49959 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.58□□□□□ -1.2
MRE11P49959 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
MRE11P49959 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.58□□□□□ -1.2
MRE11P49959 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 AL355032.1-201ENST00000472981 438 ntBASIC7.58□□□□□ -1.2
MRE11P49959 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 RN7SL152P-201ENST00000484176 298 ntBASIC7.58□□□□□ -1.2
MRE11P49959 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.58□□□□□ -1.2
MRE11P49959 AC008417.1-201ENST00000510014 565 ntBASIC7.58□□□□□ -1.2
MRE11P49959 TPT1P8-201ENST00000510120 555 ntBASIC7.58□□□□□ -1.2
MRE11P49959 GUSBP9-201ENST00000510138 584 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.58□□□□□ -1.2
MRE11P49959 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 SCARNA6-201ENST00000515982 265 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC009879.1-201ENST00000520029 839 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.58□□□□□ -1.2
MRE11P49959 AL031846.1-201ENST00000560933 314 ntBASIC7.58□□□□□ -1.2
MRE11P49959 OR4C49P-201ENST00000563891 900 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.58□□□□□ -1.2
MRE11P49959 AP001267.4-201ENST00000602598 545 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC008536.1-201ENST00000602872 669 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AC138473.1-201ENST00000605717 526 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AL031777.2-201ENST00000611953 196 ntBASIC7.58□□□□□ -1.2
MRE11P49959 AL512506.1-201ENST00000613918 449 ntBASIC7.58□□□□□ -1.2
MRE11P49959 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
MRE11P49959 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms