Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HADHAP40939 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HADHAP40939 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
HADHAP40939 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HADHAP40939 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.44□□□□□ -1.38
HADHAP40939 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.44□□□□□ -1.38
HADHAP40939 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.44□□□□□ -1.38
HADHAP40939 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 SNORD16-201ENST00000362803 99 ntBASIC6.44□□□□□ -1.38
HADHAP40939 RNU1-84P-201ENST00000365447 164 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AL451142.1-201ENST00000375867 775 ntBASIC6.44□□□□□ -1.38
HADHAP40939 VIM2P-201ENST00000402383 1294 ntBASIC6.44□□□□□ -1.38
HADHAP40939 UBTFL2-201ENST00000411859 1191 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AKR1B10P1-201ENST00000425765 942 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AC083862.1-201ENST00000427378 1242 ntBASIC6.44□□□□□ -1.38
HADHAP40939 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.44□□□□□ -1.38
HADHAP40939 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.44□□□□□ -1.38
HADHAP40939 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.44□□□□□ -1.38
HADHAP40939 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.44□□□□□ -1.38
HADHAP40939 AC138517.1-201ENST00000515724 568 ntBASIC6.44□□□□□ -1.38
HADHAP40939 Vault.2-201ENST00000516519 98 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.44□□□□□ -1.38
HADHAP40939 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.44□□□□□ -1.38
HADHAP40939 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 MIR4732-201ENST00000581873 76 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AC090616.1-201ENST00000583895 447 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AC024255.1-201ENST00000614376 102 ntBASIC6.44□□□□□ -1.38
HADHAP40939 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.44□□□□□ -1.38
HADHAP40939 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 CR382285.2-201ENST00000624662 1495 ntBASIC6.44□□□□□ -1.38
HADHAP40939 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HADHAP40939 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HADHAP40939 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.44□□□□□ -1.38
HADHAP40939 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.43□□□□□ -1.38
HADHAP40939 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HADHAP40939 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 RNA5SP514-201ENST00000363717 111 ntBASIC6.43□□□□□ -1.38
HADHAP40939 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HADHAP40939 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 U3.43-201ENST00000410734 213 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 MRPS21P5-201ENST00000417885 231 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 RPL34P27-201ENST00000428810 349 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.43□□□□□ -1.38
HADHAP40939 AC099670.1-201ENST00000455141 783 ntBASIC6.43□□□□□ -1.38
HADHAP40939 RN7SL741P-201ENST00000482473 289 ntBASIC6.43□□□□□ -1.38
HADHAP40939 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 NPM1P52-201ENST00000518264 846 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AP003080.1-202ENST00000526526 915 ntBASIC6.43□□□□□ -1.38
HADHAP40939 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.43□□□□□ -1.38
HADHAP40939 AL121579.2-201ENST00000555466 590 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AC037479.1-201ENST00000558361 625 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AC133552.4-201ENST00000576103 676 ntBASIC6.43□□□□□ -1.38
HADHAP40939 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 WBP1LP11-201ENST00000586141 328 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.43□□□□□ -1.38
HADHAP40939 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.43□□□□□ -1.38
HADHAP40939 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.43□□□□□ -1.38
HADHAP40939 AC020658.4-201ENST00000613987 684 ntBASIC6.43□□□□□ -1.38
HADHAP40939 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.43□□□□□ -1.38
HADHAP40939 AL162377.2-201ENST00000624532 337 ntBASIC6.43□□□□□ -1.38
HADHAP40939 SHQ1P1-201ENST00000437111 1544 ntBASIC6.43□□□□□ -1.38
HADHAP40939 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms