Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.8□□□□□ -1.16
COL15A1P39059 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.8□□□□□ -1.16
COL15A1P39059 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 TMEM97P2-201ENST00000517841 403 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.8□□□□□ -1.16
COL15A1P39059 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.8□□□□□ -1.16
COL15A1P39059 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.8□□□□□ -1.16
COL15A1P39059 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.8□□□□□ -1.16
COL15A1P39059 AC010547.6-201ENST00000571789 193 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 MIR4776-2-201ENST00000580204 80 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 AC119674.1-202ENST00000641333 1860 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
COL15A1P39059 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.79□□□□□ -1.16
COL15A1P39059 SALL4P7-201ENST00000555779 3120 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 FUNDC2P3-201ENST00000334716 533 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.79□□□□□ -1.16
COL15A1P39059 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.79□□□□□ -1.16
COL15A1P39059 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 AL391361.1-201ENST00000405580 489 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 RPS3AP2-201ENST00000407190 754 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 RN7SKP293-201ENST00000411389 296 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 Z93019.1-201ENST00000416450 973 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 BX119321.1-201ENST00000428912 797 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.79□□□□□ -1.16
COL15A1P39059 RPS27AP3-201ENST00000453803 454 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AL122020.1-201ENST00000472287 459 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.79□□□□□ -1.16
COL15A1P39059 ATP5LP3-201ENST00000514223 304 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.79□□□□□ -1.16
COL15A1P39059 IGKV2-19-201ENST00000518132 283 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.79□□□□□ -1.16
COL15A1P39059 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.79□□□□□ -1.16
COL15A1P39059 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.79□□□□□ -1.16
COL15A1P39059 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.79□□□□□ -1.16
COL15A1P39059 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 MIR4301-201ENST00000577203 66 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 AL357562.1-201ENST00000624911 609 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 OR7A1P-202ENST00000641542 1158 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 OR8G3P-202ENST00000641572 1255 ntBASIC7.79□□□□□ -1.16
COL15A1P39059 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL15A1P39059 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
COL15A1P39059 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
COL15A1P39059 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 AC008957.3-201ENST00000624112 2242 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.78□□□□□ -1.16
COL15A1P39059 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.78□□□□□ -1.16
COL15A1P39059 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL15A1P39059 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 AC027088.4-201ENST00000611559 1947 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
COL15A1P39059 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL15A1P39059 RNA5SP478-201ENST00000364657 115 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.78□□□□□ -1.16
COL15A1P39059 RPL35AP3-201ENST00000414680 288 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 AC093155.2-201ENST00000420734 937 ntBASIC7.78□□□□□ -1.16
COL15A1P39059 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.78□□□□□ -1.16
COL15A1P39059 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.78□□□□□ -1.16
COL15A1P39059 AL512593.1-201ENST00000444758 779 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms