Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AP001858.2-201ENST00000536213 601 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.06□□□□□ -1.44
SHMT2P34897 OR1E3-201ENST00000575608 948 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 AP005136.2-201ENST00000583253 1049 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 AP001823.1-201ENST00000604056 1003 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 AL445649.1-201ENST00000615941 691 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC016542.2-201ENST00000624201 619 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 AC027575.3-201ENST00000583058 2747 ntBASIC6.06□□□□□ -1.44
SHMT2P34897 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHMT2P34897 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHMT2P34897 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHMT2P34897 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SHMT2P34897 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.06□□□□□ -1.44
SHMT2P34897 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.05□□□□□ -1.44
SHMT2P34897 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHMT2P34897 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 RNU1-49P-201ENST00000363468 159 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 RNU1-65P-201ENST00000363919 148 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.05□□□□□ -1.44
SHMT2P34897 AL445238.1-204ENST00000400311 463 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 RPSAP65-201ENST00000429660 595 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.05□□□□□ -1.44
SHMT2P34897 AK3P5-201ENST00000432033 519 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 RPSAP40-201ENST00000442343 891 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 RPL5P7-201ENST00000444235 813 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC010240.2-201ENST00000445363 1205 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AL590004.3-202ENST00000445883 451 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 AL451063.1-201ENST00000450164 1133 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC104339.1-201ENST00000465478 348 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC090958.1-201ENST00000511122 351 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 RPA2P3-201ENST00000533268 770 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 OR4A40P-201ENST00000533878 948 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.05□□□□□ -1.44
SHMT2P34897 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.05□□□□□ -1.44
SHMT2P34897 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC026826.3-201ENST00000561747 158 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC073389.3-201ENST00000609434 935 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 AC097641.3-201ENST00000613523 464 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHMT2P34897 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHMT2P34897 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.05□□□□□ -1.44
SHMT2P34897 AC024651.2-201ENST00000562480 2098 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 ZNF101P1-201ENST00000435701 1720 ntBASIC6.05□□□□□ -1.44
SHMT2P34897 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SHMT2P34897 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SHMT2P34897 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.05□□□□□ -1.44
SHMT2P34897 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHMT2P34897 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.04□□□□□ -1.44
SHMT2P34897 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.04□□□□□ -1.44
SHMT2P34897 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SHMT2P34897 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.04□□□□□ -1.44
SHMT2P34897 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.04□□□□□ -1.44
SHMT2P34897 RPL24P2-201ENST00000421023 475 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHMT2P34897 AC016908.1-201ENST00000442571 1219 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.04□□□□□ -1.44
SHMT2P34897 AC068491.1-201ENST00000449539 1241 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 OR52I1-201ENST00000450052 1050 ntBASIC6.04□□□□□ -1.44
SHMT2P34897 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms