Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC021269.1-201ENST00000526860 705 ntBASIC6.99□□□□□ -1.29
CIITAP33076 OR4A40P-201ENST00000533878 948 ntBASIC6.99□□□□□ -1.29
CIITAP33076 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 AC092865.1-201ENST00000544395 1023 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.99□□□□□ -1.29
CIITAP33076 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.99□□□□□ -1.29
CIITAP33076 AC002310.3-201ENST00000569728 723 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.99□□□□□ -1.29
CIITAP33076 AC068768.2-201ENST00000602352 343 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AL499605.1-201ENST00000604628 403 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AL512652.1-201ENST00000619006 500 ntBASIC6.99□□□□□ -1.29
CIITAP33076 FAM27E2-201ENST00000619668 403 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 AC003992.1-201ENST00000635364 557 ntBASIC6.99□□□□□ -1.29
CIITAP33076 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.99□□□□□ -1.29
CIITAP33076 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.99□□□□□ -1.29
CIITAP33076 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.99□□□□□ -1.29
CIITAP33076 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.99□□□□□ -1.29
CIITAP33076 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CIITAP33076 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 AC006455.6-201ENST00000426192 893 ntBASIC6.98□□□□□ -1.29
CIITAP33076 AL512593.1-201ENST00000444758 779 ntBASIC6.98□□□□□ -1.29
CIITAP33076 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 RBBP4P1-201ENST00000502424 1276 ntBASIC6.98□□□□□ -1.29
CIITAP33076 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 ACTR6P1-201ENST00000514311 1104 ntBASIC6.98□□□□□ -1.29
CIITAP33076 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.98□□□□□ -1.29
CIITAP33076 OR4H6P-201ENST00000563771 921 ntBASIC6.98□□□□□ -1.29
CIITAP33076 AC007346.1-201ENST00000569208 867 ntBASIC6.98□□□□□ -1.29
CIITAP33076 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 AC141002.1-201ENST00000607025 279 ntBASIC6.98□□□□□ -1.29
CIITAP33076 AC092266.1-201ENST00000610958 165 ntBASIC6.98□□□□□ -1.29
CIITAP33076 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 IFIT1P1-201ENST00000400497 1449 ntBASIC6.98□□□□□ -1.29
CIITAP33076 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CIITAP33076 AC022034.1-201ENST00000512867 2156 ntBASIC6.98□□□□□ -1.29
CIITAP33076 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.98□□□□□ -1.29
CIITAP33076 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.98□□□□□ -1.29
CIITAP33076 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 AL354854.1-201ENST00000455940 1363 ntBASIC6.97□□□□□ -1.29
CIITAP33076 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 ABCA11P-202ENST00000504019 2110 ntBASIC6.97□□□□□ -1.29
CIITAP33076 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 OR56A4-201ENST00000330728 1209 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AC240504.1-201ENST00000395709 845 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AP003170.5-201ENST00000397185 335 ntBASIC6.97□□□□□ -1.29
CIITAP33076 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 RPL35AP31-201ENST00000418340 337 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 SEPT14P12-201ENST00000442280 560 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 AC009963.3-201ENST00000458090 486 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AC073594.1-201ENST00000462065 364 ntBASIC6.97□□□□□ -1.29
CIITAP33076 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.97□□□□□ -1.29
CIITAP33076 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 AC091167.5-201ENST00000605689 894 ntBASIC6.97□□□□□ -1.29
CIITAP33076 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.97□□□□□ -1.29
CIITAP33076 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms