Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL4A5P29400 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.1□□□□□ -1.27
COL4A5P29400 U8.4-201ENST00000363626 134 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 RPA2P2-201ENST00000419698 796 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A5P29400 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A5P29400 OR7E116P-201ENST00000448529 957 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.09□□□□□ -1.27
COL4A5P29400 RN7SL583P-201ENST00000475692 287 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A5P29400 NRBF2P4-201ENST00000520874 850 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.09□□□□□ -1.27
COL4A5P29400 RN7SL708P-201ENST00000580952 299 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A5P29400 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A5P29400 AL445647.2-201ENST00000615170 130 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC090510.2-201ENST00000617465 629 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A5P29400 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.09□□□□□ -1.27
COL4A5P29400 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 AC016583.1-201ENST00000624221 2431 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL4A5P29400 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL4A5P29400 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.09□□□□□ -1.27
COL4A5P29400 RPL23AP27-201ENST00000415161 451 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 METTL15P3-201ENST00000415522 1221 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AL590762.4-201ENST00000425885 253 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.09□□□□□ -1.27
COL4A5P29400 CYCSP12-201ENST00000437729 300 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC019185.1-201ENST00000442718 389 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC026254.2-201ENST00000475295 371 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.09□□□□□ -1.27
COL4A5P29400 RN7SL30P-201ENST00000488416 306 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC139365.2-201ENST00000517972 253 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.09□□□□□ -1.27
COL4A5P29400 AC096996.1-201ENST00000563813 325 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.09□□□□□ -1.27
COL4A5P29400 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A5P29400 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A5P29400 AC011369.2-201ENST00000624423 1567 ntBASIC7.09□□□□□ -1.28
COL4A5P29400 TNPO1P2-201ENST00000426249 2665 ntBASIC7.09□□□□□ -1.28
COL4A5P29400 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A5P29400 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL4A5P29400 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 MAPK10-323ENST00000641493 3207 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 BX322650.1-201ENST00000332359 2143 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL4A5P29400 GAPDHP24-201ENST00000328713 983 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL4A5P29400 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 RN7SKP166-201ENST00000410812 305 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A5P29400 FAR2P1-206ENST00000449736 709 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 OR7A15P-201ENST00000449848 1009 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A5P29400 AC110775.1-201ENST00000513721 462 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A5P29400 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 HMGN2P6-201ENST00000551091 273 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A5P29400 AC145423.1-201ENST00000605712 336 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 SNORD91A-202ENST00000609620 191 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AL139099.4-201ENST00000614802 114 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 AC022905.1-201ENST00000503430 3048 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms