Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RN7SL55P-201ENST00000464534 297 ntBASIC8.24□□□□□ -1.09
RFX1P22670 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 ARL4AP1-201ENST00000503220 705 ntBASIC8.24□□□□□ -1.09
RFX1P22670 DSTNP2-201ENST00000504533 515 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC109927.2-201ENST00000506416 303 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC104108.1-201ENST00000509930 412 ntBASIC8.24□□□□□ -1.09
RFX1P22670 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RFX1P22670 OR5AZ1P-201ENST00000527448 943 ntBASIC8.24□□□□□ -1.09
RFX1P22670 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 AP000619.2-201ENST00000546014 969 ntBASIC8.24□□□□□ -1.09
RFX1P22670 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 ULK4P2-202ENST00000564187 492 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 MIR4666A-201ENST00000580160 79 ntBASIC8.24□□□□□ -1.09
RFX1P22670 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.24□□□□□ -1.09
RFX1P22670 RSL24D1P11-201ENST00000591045 491 ntBASIC8.24□□□□□ -1.09
RFX1P22670 EXOSC3P2-201ENST00000594464 497 ntBASIC8.24□□□□□ -1.09
RFX1P22670 VN1R88P-201ENST00000596787 292 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 AC005518.2-201ENST00000603254 282 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AC018690.1-201ENST00000608144 626 ntBASIC8.24□□□□□ -1.09
RFX1P22670 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AL139418.1-201ENST00000613613 177 ntBASIC8.24□□□□□ -1.09
RFX1P22670 WT1-AS_8.1-201ENST00000615200 275 ntBASIC8.24□□□□□ -1.09
RFX1P22670 AL590240.3-201ENST00000621416 943 ntBASIC8.24□□□□□ -1.09
RFX1P22670 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.24□□□□□ -1.09
RFX1P22670 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.24□□□□□ -1.09
RFX1P22670 HYDIN2-203ENST00000614586 13885 ntBASIC8.24□□□□□ -1.09
RFX1P22670 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RFX1P22670 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 AC074198.1-201ENST00000506546 1397 ntBASIC8.23□□□□□ -1.09
RFX1P22670 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 OR9K2-201ENST00000305377 1122 ntBASIC8.23□□□□□ -1.09
RFX1P22670 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 GAS8-AS1-201ENST00000408886 435 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.23□□□□□ -1.09
RFX1P22670 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 UBE2V1P10-201ENST00000414685 269 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 AC003071.2-201ENST00000423857 315 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 RPL21P43-201ENST00000425440 472 ntBASIC8.23□□□□□ -1.09
RFX1P22670 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 OR13K1P-201ENST00000444577 975 ntBASIC8.23□□□□□ -1.09
RFX1P22670 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 AC022730.2-201ENST00000465359 452 ntBASIC8.23□□□□□ -1.09
RFX1P22670 RN7SL36P-201ENST00000469345 276 ntBASIC8.23□□□□□ -1.09
RFX1P22670 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 CEACAMP3-202ENST00000483806 638 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AC073610.1-201ENST00000489971 396 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 AC112198.1-201ENST00000505369 1220 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AC108120.1-201ENST00000506543 991 ntBASIC8.23□□□□□ -1.09
RFX1P22670 HNRNPKP5-201ENST00000515300 253 ntBASIC8.23□□□□□ -1.09
RFX1P22670 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 AP000662.1-201ENST00000530952 487 ntBASIC8.23□□□□□ -1.09
RFX1P22670 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 RERGL-202ENST00000536890 367 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 AC006530.1-201ENST00000555980 571 ntBASIC8.23□□□□□ -1.09
RFX1P22670 AC044913.1-201ENST00000557200 430 ntBASIC8.23□□□□□ -1.09
RFX1P22670 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms