Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TMEM75-201ENST00000624314 2165 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 AC092724.1-201ENST00000624623 3397 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 MIR4302-201ENST00000638058 60 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 AC119674.1-213ENST00000641177 1386 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 Z93929.1-201ENST00000418200 1475 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGA1P17096 AC015689.2-201ENST00000528172 1738 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 TMSB4XP4-201ENST00000323496 618 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HMGA1P17096 OR10R3P-201ENST00000361688 942 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 AC087752.1-201ENST00000391360 558 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 EEF1B2P8-201ENST00000414101 671 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 NMD3P2-201ENST00000421815 761 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGA1P17096 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGA1P17096 AL161636.2-201ENST00000445179 927 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.28□□□□□ -1.4
HMGA1P17096 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGA1P17096 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGA1P17096 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGA1P17096 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 OR4A40P-201ENST00000533878 948 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGA1P17096 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGA1P17096 AC020978.7-201ENST00000575953 1187 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGA1P17096 AC011445.2-201ENST00000599274 173 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGA1P17096 OR8G3P-202ENST00000641572 1255 ntBASIC6.28□□□□□ -1.4
HMGA1P17096 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGA1P17096 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGA1P17096 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGA1P17096 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGA1P17096 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HMGA1P17096 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC016739.1-201ENST00000405359 345 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.27□□□□□ -1.41
HMGA1P17096 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGA1P17096 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGA1P17096 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.27□□□□□ -1.41
HMGA1P17096 HMGN1P36-201ENST00000446623 298 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AL445665.1-202ENST00000452436 324 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AL022319.1-201ENST00000458183 1167 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 RN7SL174P-201ENST00000475578 289 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC027544.3-201ENST00000535082 757 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.27□□□□□ -1.41
HMGA1P17096 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC027667.1-201ENST00000545814 304 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 AC011497.2-201ENST00000600255 639 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGA1P17096 AC126175.1-201ENST00000617041 758 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HMGA1P17096 RAD17P2-201ENST00000451754 1977 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 OR13C1P-202ENST00000641378 2919 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 LCOR-201ENST00000286067 4542 ntBASIC6.27□□□□□ -1.41
HMGA1P17096 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGA1P17096 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGA1P17096 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 AC009948.3-201ENST00000603415 1798 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms