Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 uc_338.26-201ENST00000612659 160 ntBASIC5□□□□□ -1.61
CCL3L1P16619 AC097641.3-201ENST00000613523 464 ntBASIC5□□□□□ -1.61
CCL3L1P16619 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5□□□□□ -1.61
CCL3L1P16619 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 RBMY1HP-201ENST00000382759 1389 ntBASIC5□□□□□ -1.61
CCL3L1P16619 HSPD1P9-201ENST00000420325 1636 ntBASIC5□□□□□ -1.61
CCL3L1P16619 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5□□□□□ -1.61
CCL3L1P16619 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 AC008627.1-201ENST00000517511 1704 ntBASIC5□□□□□ -1.61
CCL3L1P16619 AC104966.1-201ENST00000467010 1464 ntBASIC5□□□□□ -1.61
CCL3L1P16619 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCL3L1P16619 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5□□□□□ -1.61
CCL3L1P16619 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5□□□□□ -1.61
CCL3L1P16619 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 PSG10P-201ENST00000501199 1500 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC022507.1-201ENST00000548349 1505 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 SNRPEP6-201ENST00000407465 277 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 ALDH7A1P4-201ENST00000412255 178 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC016027.5-201ENST00000427227 210 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC007679.3-201ENST00000434035 414 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AMYP1-201ENST00000440059 1023 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 RPSAP40-201ENST00000442343 891 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 RPL6P30-201ENST00000443382 862 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC097463.1-201ENST00000447288 481 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 RPL23AP60-201ENST00000450011 454 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC009963.3-201ENST00000458090 486 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 CTSLP6-201ENST00000458273 1002 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC124945.1-201ENST00000485133 188 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC008945.1-201ENST00000505144 499 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 RN7SKP238-201ENST00000516483 249 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 IGKV3D-25-201ENST00000519599 235 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 OR56A7P-201ENST00000524865 941 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.99□□□□□ -1.61
CCL3L1P16619 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC026826.3-201ENST00000561747 158 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC092332.1-201ENST00000563684 829 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC004890.3-201ENST00000605566 1095 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC092266.1-201ENST00000610958 165 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC096861.1-201ENST00000616652 240 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AC073593.1-201ENST00000624500 411 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC073488.3-201ENST00000631611 778 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCL3L1P16619 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CCL3L1P16619 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 Z93929.1-201ENST00000418200 1475 ntBASIC4.99□□□□□ -1.61
CCL3L1P16619 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCL3L1P16619 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.98□□□□□ -1.61
CCL3L1P16619 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.98□□□□□ -1.61
CCL3L1P16619 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.98□□□□□ -1.61
CCL3L1P16619 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
CCL3L1P16619 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.98□□□□□ -1.61
CCL3L1P16619 AC093225.1-201ENST00000506867 1408 ntBASIC4.98□□□□□ -1.61
CCL3L1P16619 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.98□□□□□ -1.61
CCL3L1P16619 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.98□□□□□ -1.61
CCL3L1P16619 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.98□□□□□ -1.61
CCL3L1P16619 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCL3L1P16619 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 270 ms