Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CFTRP13569 MIR223-201ENST00000385204 110 ntBASIC10.13□□□□□ -0.79
CFTRP13569 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 AC009784.1-201ENST00000426484 460 ntBASIC10.13□□□□□ -0.79
CFTRP13569 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 RPS21P4-201ENST00000487122 248 ntBASIC10.13□□□□□ -0.79
CFTRP13569 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 PGAM1P13-201ENST00000507497 754 ntBASIC10.13□□□□□ -0.79
CFTRP13569 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC10.13□□□□□ -0.79
CFTRP13569 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 AP002884.5-201ENST00000595053 1132 ntBASIC10.13□□□□□ -0.79
CFTRP13569 AC010245.2-201ENST00000606908 1167 ntBASIC10.13□□□□□ -0.79
CFTRP13569 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CFTRP13569 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CFTRP13569 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CFTRP13569 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.13□□□□□ -0.79
CFTRP13569 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 HIST1H3PS1-201ENST00000404612 417 ntBASIC10.12□□□□□ -0.79
CFTRP13569 SLC35E1P1-201ENST00000419313 864 ntBASIC10.12□□□□□ -0.79
CFTRP13569 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.12□□□□□ -0.79
CFTRP13569 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC10.12□□□□□ -0.79
CFTRP13569 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC10.12□□□□□ -0.79
CFTRP13569 OR4A42P-201ENST00000531397 938 ntBASIC10.12□□□□□ -0.79
CFTRP13569 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC10.12□□□□□ -0.79
CFTRP13569 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.12□□□□□ -0.79
CFTRP13569 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC10.12□□□□□ -0.79
CFTRP13569 AC073342.3-201ENST00000624211 193 ntBASIC10.12□□□□□ -0.79
CFTRP13569 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC10.12□□□□□ -0.79
CFTRP13569 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC10.12□□□□□ -0.79
CFTRP13569 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 MFSD8-217ENST00000641178 4374 ntBASIC10.12□□□□□ -0.79
CFTRP13569 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CFTRP13569 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC10.11□□□□□ -0.79
CFTRP13569 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC10.11□□□□□ -0.79
CFTRP13569 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC10.11□□□□□ -0.79
CFTRP13569 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CFTRP13569 AL133173.1-201ENST00000423458 397 ntBASIC10.11□□□□□ -0.79
CFTRP13569 AL590762.4-201ENST00000425885 253 ntBASIC10.11□□□□□ -0.79
CFTRP13569 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC10.11□□□□□ -0.79
CFTRP13569 RPS4XP1-201ENST00000482189 787 ntBASIC10.11□□□□□ -0.79
CFTRP13569 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC10.11□□□□□ -0.79
CFTRP13569 RPL32P33-201ENST00000487023 394 ntBASIC10.11□□□□□ -0.79
CFTRP13569 AC073610.1-201ENST00000489971 396 ntBASIC10.11□□□□□ -0.79
CFTRP13569 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC10.11□□□□□ -0.79
CFTRP13569 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC10.11□□□□□ -0.79
CFTRP13569 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC10.11□□□□□ -0.79
CFTRP13569 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.11□□□□□ -0.79
CFTRP13569 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC10.11□□□□□ -0.79
CFTRP13569 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC10.11□□□□□ -0.79
CFTRP13569 uc_338.26-201ENST00000612659 160 ntBASIC10.11□□□□□ -0.79
CFTRP13569 MIR6810-201ENST00000622701 70 ntBASIC10.11□□□□□ -0.79
CFTRP13569 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CFTRP13569 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CFTRP13569 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
CFTRP13569 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CFTRP13569 OFD1P10Y-201ENST00000434110 1433 ntBASIC10.11□□□□□ -0.79
CFTRP13569 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CFTRP13569 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CFTRP13569 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC10.11□□□□□ -0.79
CFTRP13569 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC10.1□□□□□ -0.79
CFTRP13569 RNU1-106P-201ENST00000384382 164 ntBASIC10.1□□□□□ -0.79
CFTRP13569 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC10.1□□□□□ -0.79
CFTRP13569 AC019185.1-201ENST00000442718 389 ntBASIC10.1□□□□□ -0.79
CFTRP13569 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC10.1□□□□□ -0.79
CFTRP13569 SCARNA6.1-201ENST00000516989 238 ntBASIC10.1□□□□□ -0.79
CFTRP13569 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC10.1□□□□□ -0.79
CFTRP13569 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC10.1□□□□□ -0.79
CFTRP13569 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC10.1□□□□□ -0.79
CFTRP13569 AC063977.5-201ENST00000601044 974 ntBASIC10.1□□□□□ -0.79
CFTRP13569 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CFTRP13569 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 GTF2IP4-201ENST00000453092 2054 ntBASIC10.1□□□□□ -0.79
CFTRP13569 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CFTRP13569 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CFTRP13569 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC10.1□□□□□ -0.79
CFTRP13569 RNA5SP30-201ENST00000365552 115 ntBASIC10.1□□□□□ -0.79
CFTRP13569 RN7SKP213-201ENST00000410746 298 ntBASIC10.1□□□□□ -0.79
CFTRP13569 NENFP1-201ENST00000419476 466 ntBASIC10.1□□□□□ -0.79
CFTRP13569 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC10.1□□□□□ -0.79
CFTRP13569 VN1R54P-201ENST00000435210 1049 ntBASIC10.1□□□□□ -0.79
CFTRP13569 RPSAP50-201ENST00000481955 852 ntBASIC10.1□□□□□ -0.79
CFTRP13569 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms