Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 SNORA51.9-201ENST00000384295 124 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AL121835.1-201ENST00000404250 354 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 SNORA77.2-201ENST00000408571 112 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 PNKDP1-201ENST00000435914 430 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC097463.1-201ENST00000447288 481 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC068491.1-201ENST00000449539 1241 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AL162739.1-201ENST00000450606 307 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC114728.1-201ENST00000488289 483 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC009879.1-201ENST00000520029 839 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AP001804.1-201ENST00000526868 919 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 DPPA3P2-201ENST00000553589 478 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC009779.8-202ENST00000607990 932 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC073488.3-201ENST00000631611 778 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 CASC19-274ENST00000642018 970 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC005225.5-201ENST00000623547 2225 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC093829.1-201ENST00000506662 1618 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RNU1-65P-201ENST00000363919 148 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AL451142.1-201ENST00000375867 775 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 MIR130B-202ENST00000385018 82 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RNA5SP431-201ENST00000410312 120 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RN7SKP166-201ENST00000410812 305 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC245096.1-201ENST00000413104 546 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 NMD3P2-201ENST00000421815 761 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC093166.3-201ENST00000448785 303 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RPL23AP40-201ENST00000487630 390 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CCDC11P1-201ENST00000503137 1162 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 Vault.2-201ENST00000516519 98 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 OR56A7P-201ENST00000524865 941 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC084121.1-201ENST00000533882 835 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC244502.2-201ENST00000543361 851 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC091167.5-201ENST00000605689 894 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AL136097.3-201ENST00000611097 505 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 AC114876.1-201ENST00000490962 1366 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 PSG10P-201ENST00000501199 1500 ntBASIC6.13□□□□□ -1.43
HLA-DQB2P05538 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB2P05538 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms