Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SPTA1P02549 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SPTA1P02549 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 RN7SL57P-201ENST00000493687 290 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.67□□□□□ -1.5
SPTA1P02549 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 IGKV1D-22-201ENST00000518953 324 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 MIR4330-201ENST00000579077 105 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 AP002884.5-201ENST00000595053 1132 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 RPL12P48-201ENST00000605620 304 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 AC120057.5-201ENST00000623840 154 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 CASC19-228ENST00000641414 1684 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 IARS-205ENST00000443024 4341 ntTSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 CCNT2P1-201ENST00000423082 1315 ntBASIC5.67□□□□□ -1.5
SPTA1P02549 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
SPTA1P02549 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPTA1P02549 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SPTA1P02549 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 MRRFP1-201ENST00000435941 1675 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC5.66□□□□□ -1.5
SPTA1P02549 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC5.66□□□□□ -1.5
SPTA1P02549 AL645733.1-201ENST00000402250 217 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 VN1R54P-201ENST00000435210 1049 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.66□□□□□ -1.5
SPTA1P02549 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 RAB28P2-201ENST00000454299 641 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 RPL7P6-201ENST00000480903 738 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AL353763.2-201ENST00000623489 1903 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 WDR95P-201ENST00000425638 1542 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SPTA1P02549 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.66□□□□□ -1.5
SPTA1P02549 RNA5SP507-201ENST00000363603 121 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC009220.1-201ENST00000451614 275 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC026826.1-201ENST00000493002 361 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 SUMO2P7-201ENST00000511179 285 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 GSTP1P1-201ENST00000548078 319 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC018552.1-201ENST00000562099 811 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.66□□□□□ -1.5
SPTA1P02549 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC5.66□□□□□ -1.5
SPTA1P02549 AP001823.1-201ENST00000604056 1003 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 RFPL4AP6-201ENST00000616792 846 ntBASIC5.66□□□□□ -1.5
SPTA1P02549 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPTA1P02549 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SPTA1P02549 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPTA1P02549 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPTA1P02549 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPTA1P02549 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms